New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2700077	34 (0.920)	4 (0.120)	4/230	4.2	12.0%	intergenic (+154/+40)	yfhL/shoB	putative 4Fe‑4S cluster‑containing protein/toxic membrane protein
	?	NC_000913	= 2700087	28 (0.830)					intergenic (+164/+30)	yfhL/shoB	putative 4Fe‑4S cluster‑containing protein/toxic membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATATTCTACTCTGGAAGTAGAGTATTAATTATATTACTGGGAAGCCTTAACGCCATTATATTTATTTAATTGATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAGGTGCGTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2699923‑2700077 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggtgcgtccgGTGAACCAGTCGGACGCACCTTTAATAACTATAAATAAGTGTCTGGGCAGATACTATATAAATTAACTTAGTGAATGATTATGCTAATGTCATCAATTAAATAAATATAATGGCGTTAAGGCTTCCCAGTAATATAATTAA  <  NC_000913/2700087‑2699947                                                                                                                                                                                                                                                                                                          ATATTCTACTCTGGAAGTAGAGTATTAATTATATTACTGGGAAGCCTTAACGCCATTATATTTATTTAATTGATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAGGT                                                                                                                                                      <  7:62105/148‑1                    GAGTATTAATTATATTACTGGGAAGCCTTAACGCCATTATATTTATTTAATTGATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAA                                                                                                                                                         >  1:142522/1‑126                    GAGTATTAATTATATTACTGGGAAGCCTTAACGCCATTATATTTATTTAATTGATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAA                                                                                                                                                         <  2:142522/126‑1                                                        TTATATTTATTTAATTGATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAG                                                                                                                                                        >  1:182454/1‑91                                                        TTATATTTATTTAATTGATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAG                                                                                                                                                        <  2:182454/91‑1                                                                        GATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAGGTGCGTCCGGTGAACCAGTCGGACGCACCTTTAAT                                                                                                                     >  5:107235/1‑110                                                                        GATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAGGTGCGTCCGGTGAACCAGTCGGACGCACCTTTAAT                                                                                                                     <  6:107235/110‑1                                                                                                TAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAGGTGCGTCCGGTGAACCAGTCGGACGCACCTTTAATAACTATAAAT                                                                                                           <  3:106771/96‑1                                                                                                TAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAGGTGCGTCCGGTGAACCAGTCGGACGCACCTTTAATAACTATAAAT                                                                                                           >  4:106771/1‑96                                                                                                                                                   GTGCGTCCGGTGAACCAGTCGGACGCACCTTTAATAACTATAAATAAGTGTCTGGGCAGATACTATATAAATTAACTTAGTGAATGATTATGCTAATGTCATCAATTAAATAAATATAATGGCGTTAAGGCTTCCCAGTAA           <  1:37374/141‑1                                                                                                                                                   GTGCGTCCGGTGAACCAGTCGGACGCACCTTTAATAACTATAAATAAGTGTCTGGGCAGATACTATATAAATTAACTTAGTGAATGATTATGCTAATGTCATCAATTAAATAAATATAATGGCGTTAAGGCTTCCCAGTAA           >  2:37374/1‑141                                                                                                                                                    TGCGTCCGGTGAACCAGTCGGACGCACCTTTAATAACTATAAATAAGTGTCTGGGCAGATACTATATAAATTAACTTAGTGAATGATTATGCTAATGTCATCAATTAAATAAATATAATGGCGTTAAGGCTTCCCAGTAATATAATTAA  <  5:15890/149‑1                                                                                                                                                    TGCGTCCGGTGAACCAGTCGGACGCACCTTTAATAACTATAAATAAGTGTCTGGGCAGATACTATATAAATTAACTTAGTGAATGATTATGCTAATGTCATCAATTAAATAAATATAATGGCGTTAAGGCTTCC                 >  1:90187/1‑134                                                                                                                                                    TGCGTCCGGTGAACCAGTCGGACGCACCTTTAATAACTATAAATAAGTGTCTGGGCAGATACTATATAAATTAACTTAGTGAATGATTATGCTAATGTCATCAATTAAATAAATATAATGGCGTTAAGGCTTCC                 <  2:90187/134‑1                                                                                                                                                                                                                                                                                                          ATATTCTACTCTGGAAGTAGAGTATTAATTATATTACTGGGAAGCCTTAACGCCATTATATTTATTTAATTGATGACATTAGCATAATCATTCACTAAGTTAATTTATATAGTATCTGCCCAGACACTTATTTATAGTTATTAAAGGTGCGTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2699923‑2700077 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggtgcgtccgGTGAACCAGTCGGACGCACCTTTAATAACTATAAATAAGTGTCTGGGCAGATACTATATAAATTAACTTAGTGAATGATTATGCTAATGTCATCAATTAAATAAATATAATGGCGTTAAGGCTTCCCAGTAATATAATTAA  <  NC_000913/2700087‑2699947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.