| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3907905 | 26 (0.700) | 4 (0.120) | 4/238 | 4.3 | 14.4% | coding (462/774 nt) | pstB | phosphate ABC transporter ATPase |
| ? | NC_000913 | = 3907917 | 23 (0.660) | coding (450/774 nt) | pstB | phosphate ABC transporter ATPase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAACACGGTTCGTCGAGCAGCAGCACTTCCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3907822‑3907905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagagCGGTTACTCTCTCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGACGAACCGTGTTCGGCGCTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCAC < NC_000913/3907917‑3907777 GAACACGGTTCGTCGAGCAGCAGCACTTCCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGCGGTTACTCTCTCTCTGGTGGTCAGCAACA < 1:152244/114‑1GAACACGGTTCGTCGAGCAGCAGCACTTCCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGCGGTTACTCTCTCTCTGGTGGTCAGCAACA > 2:152244/1‑114 GAGCAGCAGCACTTCCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGCGGTTACTCTCTCTCTGGT < 3:55029/89‑1 GAGCAGCAGCACTTCCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAGCGGTTACTCTCTCTCTGGT > 4:55029/1‑89 CACCAGAGCGGTTACTCTCTCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGACGAACCGTGTTCGGCGCTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCAC < 2:132416/149‑1 CAGAGCGGTTACTCTCTCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGACGAACCGTGTTCGGCGCTCGACCCTATCTCTACCGGGCGTAT > 3:93702/1‑131 CAGAGCGGTTACTCTCTCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGACGAACCGTGTTCGGCGCTCGACCCTATCTCTACCGGGCGTAT < 4:93702/131‑1 GAACACGGTTCGTCGAGCAGCAGCACTTCCGGGCGAATGGCGATACCACGCGCAATACACAGACGCTGTTGCTGACCACCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3907822‑3907905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccagagCGGTTACTCTCTCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGACGAACCGTGTTCGGCGCTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCAC < NC_000913/3907917‑3907777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |