| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 856550 = | 25 (0.700) | 8 (0.240) | 8/234 | 2.2 | 26.0% | coding (588/1593 nt) | ybiT | ABC‑F family putative regulatory ATPase |
| ? | NC_000913 | 856575 = | 22 (0.650) | coding (613/1593 nt) | ybiT | ABC‑F family putative regulatory ATPase | |||||
GTTGCTCCTGGCTGGAAGCTGCGTGTGCTTCTGGCGCAGGCGCTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGTGAACGT > NC_000913/856428‑856712 | gTTGCTCCTGGCTGGAAGCTGCGTGTGCTTCTGGCGCAGGCGCTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCAt > 4:94261/1‑149 (MQ=255) gccgccgtcatgtactcatcgtagttacccggataaacgcgcagctcgccgtaatccagatccgccatgtgggtacagaccatgttaaggaagtgacggtcgtgcgagatgatgatcatGGTGCTGA‑ACGAGCGTGACAGCACCATGat > 2:185209‑M1/120‑149 (MQ=255) cTCCTGGCTGGAAGCTGCGTGTGCTTCTGGCGCAGGCGCTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGatc < 3:94261/149‑1 (MQ=255) tggAAGCTGCGTGTGCTTCTGGCGCAGGCGCTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCAtctc > 5:145374/1‑149 (MQ=255) atgtactcatcgtagttacccggataaacgcgcagctcgccgtaatccagatccgccatgtgggtacagaccatgttaaggaagtgacggtcgtgcgagatgatgatcatggtgctgaacgagcgtgacagcaccATGATCATCGtct < 3:120299‑M2/13‑1 (MQ=255) aaGCTGCGTGTGCTTCTGGCGCAGGCGCTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCa < 6:145374/149‑1 (MQ=255) gcgcTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGt > 6:57383/1‑149 (MQ=255) ccgtaatccagatccgccatgtgggtacagaccatgttaaggaagtgacggtcgtgcgagatgatgatcatGGTGCTGA‑ACGAGCGTGACAGCACCAt > 4:139266‑M1/72‑98 (MQ=255) ccgtaatccagatccgccatgtgggtacagaccatgttaaggaagtgacggtcgtgcgagatgatgatcatGGTGCTGA‑ACGAGCGTGACAGCACCAt < 3:139266‑M1/27‑1 (MQ=255) cgtaatccagatccgccatgtgggtacagaccatgttaaggaagtgacggtcgtgcgagatgatgatcatGGTGCTGA‑ACGAGCGTGACAGCACCa > 1:184950‑M1/71‑96 (MQ=255) cgtaatccagatccgccatgtgggtacagaccatgttaaggaagtgacggtcgtgcgagatgatgatcatGGTGCTGA‑ACGAGCGTGACAGCACCa < 2:184950‑M1/26‑1 (MQ=255) ggATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGa < 6:102942/95‑1 (MQ=255) ggATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGa > 5:102942/1‑95 (MQ=255) cTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCa < 2:57411/82‑1 (MQ=255) cTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCa > 1:57411/1‑82 (MQ=255) cTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGAt < 2:162632/147‑1 (MQ=255) cgaACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGc > 4:77731/1‑149 (MQ=255) cGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACTACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGa < 6:156398/127‑1 (MQ=255) cGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATggagga > 5:156398/1‑127 (MQ=255) gACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACa < 4:25918/104‑1 (MQ=255) gACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACa > 3:25918/1‑104 (MQ=255) acCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCg < 5:57383/149‑1 (MQ=255) ccTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCgg < 3:77731/149‑1 (MQ=255) acacCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGag > 8:62626/1‑148 (MQ=255) agacgatgatcatGGTGCTGTCACGCTCGTT‑CAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACAt < 3:120299‑M1/135‑1 (MQ=255) atcatggtgctgtcacgctcgttcagcaccATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACggcggc > 2:185209‑M2/31‑149 (MQ=255) atggtgctgtcacgctcgttcagcaccATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACgg < 3:139266‑M2/71‑1 (MQ=255) atggtgctgtcacgctcgttcagcaccATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACgg > 4:139266‑M2/28‑98 (MQ=255) tggtgctgtcacgctcgttcagcaccATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACg > 1:184950‑M2/27‑96 (MQ=255) tggtgctgtcacgctcgttcagcaccATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACg < 2:184950‑M2/70‑1 (MQ=255) GGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTa < 4:121821‑M1/132‑1 (MQ=255) GGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTa > 3:121821‑M1/1‑132 (MQ=255) TGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAg < 8:42115‑M1/149‑1 (MQ=255) GCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGa < 2:32681‑M1/126‑1 (MQ=255) GCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGa > 1:32681‑M1/1‑126 (MQ=255) GCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAgg < 6:166052‑M1/149‑1 (MQ=255) cGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGAt < 2:38124/118‑1 (MQ=255) cGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGAt > 1:38124/1‑118 (MQ=255) acgctcgttcagcaccATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGt < 4:120299‑M2/132‑1 (MQ=255) aGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGTGaa > 2:78938/1‑149 (MQ=255) cgacctcagcaccATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGTGAAc < 1:44542‑M2/136‑1 (MQ=255) gTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTCCGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGTGAACGt < 5:166052/149‑1 (MQ=255) agcaccATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGTGAAc > 2:44542‑M2/7‑142 (MQ=255) cATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGttt < 7:11223‑M2/85‑1 (MQ=255) cATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGttt > 8:11223‑M2/2‑86 (MQ=255) | GTTGCTCCTGGCTGGAAGCTGCGTGTGCTTCTGGCGCAGGCGCTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGA‑ACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGTGAACGT > NC_000913/856428‑856712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |