New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 320295634 (0.930)6 (0.170) 6/228 2.9 14.6% coding (1066/1239 nt) cca fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase
?NC_000913 = 3202969 38 (1.100)coding (1079/1239 nt) cca fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase
Rejected: Frequency below/above cutoff threshold.

GATCTCATCCACACCTTCCCAATGCTGAACCCAAAAACCATCGTCAAATTATTTGATTCCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3202806‑3202956
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggCCTTGCGGGTAGTCCGCTGATTCAAAACCGGTTCTGCCGCGCACGTCAGCCTCGCTGGTCAGCGCCAGTTGCTCGACACGCTGCGGTTTACGCCAGGCATCGATGGAATCAAATAATTTGACGATGGTTTTTGGGTTCAGCATTGG  <  NC_000913/3202969‑3202824
                                                                                                                                                                                                                                                                                                         
GATCTCATCCACACCTTCCCAATGCTGAACCCAAAAACCATCGTCAAACTATTTGATTCCCTCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGC                                                                                                                                                      >  5:187156/1‑149
      ATCCACACCTTCCCAATGCTGAACCCAAAAACCATCGTCAAATTATTTGATTCCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCG                                                                                                                                                     <  1:78651/144‑1
                                       ATCGTCAAATTATTTGATTCCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGCCTTGCGGGTAGTCCGC                                                                                                                                   <  1:25761/129‑1
                                       ATCGTCAAATTATTTGATTCCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGCCTTGCGGGTAGTCCGC                                                                                                                                   >  2:25761/1‑129
                                                      GATTCCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGC                                                                                                                                                      >  2:121484/1‑95
                                                                                          GAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGCCTTGCGGGTAGTCCGCTGAT                                                                                                                               >  3:88863/1‑82
                                                                                          GAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGCCTTGCGGGTAGTCCGCTGAT                                                                                                                               <  4:88863/82‑1
                                                                                                             GCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGCCTTGCGGGTAGTCCGCTGA                                                                                                                                <  3:43786/62‑1
                                                                                                             GCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGCCTTGCGGGTAGTCCGCTGA                                                                                                                                >  4:43786/1‑62
                                                                                                                                                    CGGCCTTTCGGGTAGGCCGCTGATTCAAAACCGGCTCTGCCGCGCACGGCAGCCTCGCGGGTCCGCGCCAGTTGCTCGCCACGCGGCGTTTTACGCAAGGCATCGATGGAATCAAATAATTTGACGATGGTTTTGGGGGTCAGCATTGG  <  8:162968/149‑1
                                                                                                                                                                                                                                                                                                         
GATCTCATCCACACCTTCCCAATGCTGAACCCAAAAACCATCGTCAAATTATTTGATTCCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3202806‑3202956
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggCCTTGCGGGTAGTCCGCTGATTCAAAACCGGTTCTGCCGCGCACGTCAGCCTCGCTGGTCAGCGCCAGTTGCTCGACACGCTGCGGTTTACGCCAGGCATCGATGGAATCAAATAATTTGACGATGGTTTTTGGGTTCAGCATTGG  <  NC_000913/3202969‑3202824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.