Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3423793–3424234	3424517–3424238	5–725	17 [16]	[13] 19	[rrlD]	[rrlD]

CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA  >  NC_000913/3424505‑3424666              |                                                                                                                                                     ctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa               <  5:217202/149‑1 (MQ=31) ctccGTTACTCTTTAGGAGGAGACCGCACCAGTCAAACTACCCACCAGACACTGTCCGCAACCCTGAATAAGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCt                >  2:185826/1‑148 (MQ=2)  tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACATTGTCCGAAACCAGGATTACGGGTCAACGTTAGAACATCTAACATTTATGGGTGGTATTTCAATGTCGGCTCCATGCTGACTGGCGTCCACACTTCTaa              <  1:310175/149‑1 (MQ=11)  tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCTGCTCCATGCAGACTGGCGTCCACACTTCt                >  1:229992/1‑147 (MQ=11)    cggtACTCTTTAGGAGTAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGGGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa              <  5:297907/144‑1 (MQ=12)    cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa              <  7:251559/147‑1 (MQ=32)    cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa              <  3:264226/147‑1 (MQ=32)         ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTccc       <  2:277557/149‑1 (MQ=32)          tgtttAGGAGGAGACCGCCCAAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcccc      >  8:191299/3‑148 (MQ=17)          tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa      >  4:2142/1‑149 (MQ=32)          tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa      >  7:360251/1‑149 (MQ=32)          tctTTAGGAGGAGAACTCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa      >  2:13073/1‑149 (MQ=17)            tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGCCTGGCGTCCACACTTCTAAGCCTCCCAcc    >  2:264699/1‑149 (MQ=17)              tAGGAGGAGACCGCCCCAGTCAAACTCCCCACCAGACACTGTCAGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTTTTTCAAGGTCGGCTCCATGCATACTGGCGTCCACACTTCTAAGCCTCCCACCt   <  6:245714/148‑1 (MQ=255)              tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  7:244273/146‑1 (MQ=32)              tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc     <  2:145063/146‑1 (MQ=32)              tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt   <  2:233726/148‑1 (MQ=32)              tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGACCCCACTTCTAAGCCTCCCACCtc  >  6:22106/1‑148 (MQ=17)              tAGGAGGAGACCGCCCCAGTCAAACTACCCAACAGACACTGTCCGCTACCCGGATTACGGGTCAACGTTAGAACATCAATCATTAAAGTGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc    <  6:175896/147‑1 (MQ=255)              |                                                                                                                                                     CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA  >  NC_000913/3424505‑3424666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑