New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 835518 | 23 (0.680) | 4 (0.130) | 4/242 | 3.3 | 13.9% | coding (271/963 nt) | ybiB | putative family 3 glycosyltransferase |
? | NC_000913 | = 835539 | 28 (0.890) | coding (292/963 nt) | ybiB | putative family 3 glycosyltransferase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GTTGGGCGGCGTATTGATTGCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/835370‑835518 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaacggcgTCAGGTTGGCCTGTTTACGCGCGCCGTTGTAACTG < NC_000913/835539‑835505 GTTGGGCGGCGTATTGATTGCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATACAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCG < 3:23801/149‑1 AAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGTCAGGTTGGCCTGTTTACGCGCGCCGTTGTAA > 5:51765/1‑149 GAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGTCAGGTTGGCCTGTTTACGCGCGCCGTTGTAACTG < 6:51765/149‑1 GGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGTCAGGTTGGCCTGTTTACGCGCGCCGTTGTAA < 5:14876/140‑1 GGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGTCAGGTTGGCCTGTTTACGCGCGCCGTTGTAA > 6:14876/1‑140 GTTGGGCGGCGTATTGATTGCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/835370‑835518 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaacggcgTCAGGTTGGCCTGTTTACGCGCGCCGTTGTAACTG < NC_000913/835539‑835505 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |