| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2768010 | 28 (0.830) | 6 (0.190) | 6/248 | 2.6 | 16.8% | coding (301/864 nt) | yfjP | CP4‑57 prophage; 50S ribosome‑binding GTPase family protein |
| ? | NC_000913 | = 2768033 | 33 (1.030) | coding (324/864 nt) | yfjP | CP4‑57 prophage; 50S ribosome‑binding GTPase family protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2767885‑2768010‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgcgGTACAGCGCAGCATACTCGGTATCGCGAACGCCACTTTCGCCCACGCCGGGCAGATCCACGATGGTCATAAAGTGTTCTCCAATCTGCAGGCGAAAGCGTAAAGGATCACGTGTACAGGCCGCTACATCGCTGACCGGCGATA < NC_000913/2768033‑2767891 GTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGC < 5:44483/125‑1GTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGC > 6:44483/1‑125 ATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCG > 2:166296/1‑103 TTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGGTACAGCGCAGCATACTCGGTATCGCGAA > 1:105822/1‑109 TTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGGTACAGCGCAGCATACTCGGTATCGCGAA < 2:105822/109‑1 GCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGGTACAGCGCAGCATACTCGGTATCGCGAACGCC < 5:11510/98‑1 GCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGGTACAGCGCAGCATACTCGGTATCGCGAACGCC > 6:11510/1‑98 ATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGGTACAGCGCAGCATACTCGGTATCGCGAACGCCA > 7:52085/1‑95 ATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGGTACAGCGCAGCATACTCGGTATCGCGAACGCCA < 8:52085/95‑1 TTCGCGGTACAGCGCAGCATACTCGGTATCGCGAACGCCACTTTCGCCCACGCCGGGCAGATCCACGATGGTCATAAAGTGTTCTCCAATCTGCAGGCGAAAGCGTAAAGGATCACGTGTACAGGCCGCTACATCGCTGACCGGCGATA < 7:11437/149‑1 TTCGCGGTACAGCGCAGCATACTCGGTATCGCGAACGCCACTTTCGCCCACGCCGGGCAGATCCACGATGGTCATAAAGTGTTCTCCAATCTGCAGGCGAAAGCGTAAAGGATCACGTGTACAGGCCGCTACATCGCTGACCGGCGATA > 7:41038/1‑149 GGTACAGCGCAGCATACTCGGTATCGCGAACGCCACTTTCGCCCACGCCGGGCAGATCCACGATGGTCATAAAGTGTTCTCCAATCTGCAGGCGAAAGCGTAAAGGATCACGTGTACAGGCCGCTACATCGCTGACCGGCGATA > 7:21583/1‑144 GGTACAGCGCAGCATACTCGGTATCGCGAACGCCACTTTCGCCCACGCCGGGCAGATCCACGATGGTCATAAAGTGTTCTCCAATCTGCAGGCGAAAGCGTAAAGGATCACGTGTACAGGCCGCTACATCGCTGACCGGCGATA < 8:21583/144‑1 GTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2767885‑2768010‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcgcgGTACAGCGCAGCATACTCGGTATCGCGAACGCCACTTTCGCCCACGCCGGGCAGATCCACGATGGTCATAAAGTGTTCTCCAATCTGCAGGCGAAAGCGTAAAGGATCACGTGTACAGGCCGCTACATCGCTGACCGGCGATA < NC_000913/2768033‑2767891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |