| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3688674 = | 0 (0.000) | 21 (0.650) | 18/268 | 0.9 | 56.0% | coding (500/3474 nt) | bcsC | cellulose synthase subunit |
| ? | NC_000913 | = 4506221 | 33 (1.020) | coding (935/1119 nt) | yjhC | GFO/IDH/MOCA family putative oxidoreductase. NAD(P)‑dependent | |||||
GCACGATTGCAGGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3688819‑3688674‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTTTGTCTGACCG < NC_000913/4506221‑4506075 GCAAGATTGCAGGCGACGACCGGTCATGCAGAAGAAGATGTGGCGAGTTACAACAAACTGTTCAACGGTCCGCCGCCGGAAGGTGACATTTCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCT > 4:19529/1‑148 GCAGGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAAC < 1:38519/148‑1 CAGGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTG > 2:60686/1‑149 GGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGC < 3:19529/149‑1 ATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTT > 1:138236/1‑124 ATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTT < 2:138236/124‑1 ATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTT < 8:37422/124‑1 ATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTT > 7:37422/1‑124 CAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACTTTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTGCGGCTCGCCGTGGCGAAGCGATCTTATTAATCTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATG < 1:60686/148‑1 CAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGC > 7:45975/1‑149 CAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTA > 1:6097/1‑148 CAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTA > 8:81567/1‑148 AACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATC < 1:15764/148‑1 GTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTT < 6:7008/149‑1 GCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGA < 8:45975/149‑1 CTGTCGAGTACTGGAGTACGGTGTCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGAC > 3:107398/1‑149 GAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATC < 7:81567/148‑1 GAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTC < 2:6097/149‑1 CGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTT > 2:96910/1‑141 CGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTT < 1:96910/141‑1 ATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCAATCCATATCTGAGGTCATATTGCCTTACCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTTTGTCTGACCG > 4:114298/1‑149 GCACGATTGCAGGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3688819‑3688674‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTTTGTCTGACCG < NC_000913/4506221‑4506075 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |