| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4411257 = | 56 (1.770) | 4 (0.140) | 4/250 | 3.2 | 7.3% | intergenic (+6/‑45) | yjfJ/yjfK | PspA/IM30 family protein/DUF2491 family protein |
| ? | NC_000913 | 4411284 = | 50 (1.700) | intergenic (+33/‑18) | yjfJ/yjfK | PspA/IM30 family protein/DUF2491 family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAAACGCTAACGTGTCGAGCGTAAAGCCACTATTGAGATGAAGTCCCAGCGGACCACGAGCGATAGCTGGCTTATTATCCTTGCCAAACAGACGCTGGAAAAAACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4411413‑4411257‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctggcaaCTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAAT > NC_000913/4411284‑4411431 GAAACGCTAACGTGTCGAGCGTAAAGCCACTATTGAGATGAAGTCCCAGCGGACCACGAGCGATAGCTGGCTTATTATCCTTGCCAAACAGACGCTGGAAAAAACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAG > 3:41081/1‑149 CGCTAACGTGTCGAGCGTAAAGCCACTATTGAGATGAAGTCCCAGCGGACCACGAGCGATAGCTGGCTTATTATCCTTGCCAAACAGACGCTGGAAAAAACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTG < 4:64767/149‑1 ACGTGTCGAGCGTAAAGCCACTATTGAGATGAAGTCCCAGCGGACCACGAGCGATAGCTGGCTTATTATCCTTGCCAAACAGACGCTGGAAAAAACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTGGCAA > 4:111284/1‑148 TCCCAGCGGACCACGAGCGATAGCTGGCTTATTATCCTTGCCAAACAGACGCTGGAAAAAACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTGGC > 5:100551/1‑112 TCCCAGCGGACCACGAGCGATAGCTGGCTTATTATCCTTGCCAAACAGACGCTGGAAAAAACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTGGC < 6:100551/112‑1 ACGCTGGAAAAAACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCT > 3:25682/1‑149 ACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCT > 4:84651/1‑149 CTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACG < 3:84651/148‑1 AAATAGTTGCCAGCCTTTTAGCGAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGA > 6:54518/1‑149 TGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGG > 5:14721/1‑145 GCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGAT > 1:52424/1‑148 GCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGAT < 6:14721/148‑1 GCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTC‑‑CTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTG < 3:109998/140‑1 GCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTC‑‑CTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTG > 4:109998/1‑140 ACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAAT < 4:43178/149‑1 GAAACGCTAACGTGTCGAGCGTAAAGCCACTATTGAGATGAAGTCCCAGCGGACCACGAGCGATAGCTGGCTTATTATCCTTGCCAAACAGACGCTGGAAAAAACCAGACATATTTTATCCTTAAAATAGTTGCCAGCCTTTTAGCGAGGCTGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4411413‑4411257‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggctggcaaCTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAAT > NC_000913/4411284‑4411431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |