| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 618066 | 35 (1.080) | 6 (0.210) | 4/220 | 3.5 | 15.7% | intergenic (+28/‑188) | entF/fepE | enterobactin synthase multienzyme complex component, ATP‑dependent/regulator of length of O‑antigen component of lipopolysaccharide chains |
| ? | NC_000913 | = 618073 | 33 (1.130) | intergenic (+35/‑181) | entF/fepE | enterobactin synthase multienzyme complex component, ATP‑dependent/regulator of length of O‑antigen component of lipopolysaccharide chains | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCTGGTCGCCGTGGATAGCGGAGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/617916‑618066‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccataattaTTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATAATATCCACATGCGCACAATCCTGACGATAGATATCCAGCTCCGCTATC < NC_000913/618073‑617930 GCCTGGTCGCCGTGGATAGCGGAGCTTGATATCTATCGTCAGTATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGTCCGATTATTAGCGCAACGATAAACAGGTAAATTAATATTATTTATAAAACCATAAT > 6:108948/1‑149 GATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGC > 7:15575/1‑149 GATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGC > 7:17888/1‑149 TTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAA < 8:15575/148‑1 TTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAA < 8:17888/148‑1 TTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAA < 1:60799/76‑1 TTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAA > 2:60799/1‑76 AAACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGA < 7:21584/103‑1 AAACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGA > 8:21584/1‑103 ATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATAATATCCACATGCGCACAATCCTTACGATAGATATCCAGCTCCGCTATC > 3:135542/1‑148 GCCTGGTCGCCGTGGATAGCGGAGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/617916‑618066‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccataattaTTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATAATATCCACATGCGCACAATCCTGACGATAGATATCCAGCTCCGCTATC < NC_000913/618073‑617930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |