New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 413173537 (1.140)4 (0.130) 4/228 3.6 10.0% coding (1901/2433 nt) metL Bifunctional aspartokinase/homoserine dehydrogenase 2
?NC_000913 = 4131763 38 (1.260)coding (1929/2433 nt) metL Bifunctional aspartokinase/homoserine dehydrogenase 2
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATATCGCCAGATCCACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4131579‑4131735
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcacgctACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCCG  <  NC_000913/4131763‑4131727
                                                                                                                                                                                                  
AATATCGCCAGATCCACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCC                                               <  7:26393/149‑1
      GCCAGATCCACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCAC                                          <  8:55293/148‑1
                                         CACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGC        >  3:140616/1‑147
                                         CACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGC        <  4:140616/147‑1
                                                                  GTGCGGGCTTGCCGATCAACCACACCGTGCGCGCTCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCCG  <  5:153825/128‑1
                                                                  GTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCTACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCCG  >  6:153825/1‑128
                                                                                         ACCGTGCGCGATCTGATCGACAGCGGCGATACTAATTTGTCGATCAGCGGGATCTTCTCCGGCACGCT                                       >  2:94153/1‑68
                                                                                         ACCGTGAGCGATCTGATCGACAGCTGCGATAATATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCT                                       <  1:94153/68‑1
                                                                                                                                                                                                  
AATATCGCCAGATCCACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4131579‑4131735
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcacgctACCGTCGAATTGCAGGAACAGCCAGGAGAGCGTGCCG  <  NC_000913/4131763‑4131727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.