| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,335,075 | Δ714 bp | ymiA–yciX | ymiA, yciX | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1335075 | 1335788 | 714 | 34 [0] | [0] 33 | ymiA–yciX | ymiA,yciX |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1335074 | 0 (0.000) | 33 (0.980) | 31/270 | 0.2 | 100% | intergenic (+245/‑50) | cysB/ymiA | N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein |
| ? | NC_000913 | 1335789 = | 0 (0.000) | intergenic (+331/‑42) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A | |||||
CTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTG > NC_000913/1335647‑1335926 | tttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAgaga < 2:142755‑M2/6‑1 (MQ=255)tttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGaa < 4:50986‑M2/7‑1 (MQ=255) tagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAg < 1:141910‑M2/11‑1 (MQ=255) tgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaagagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAg > 4:87643‑M2/125‑135 (MQ=255) tgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaagagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAg < 3:87643‑M2/11‑1 (MQ=255) gtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCAt > 5:143640‑M2/119‑148 (MQ=255) tagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagccgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGt > 4:119577‑M2/118‑144 (MQ=255) tagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGt < 3:119577‑M2/27‑1 (MQ=255) tctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAaga > 8:112470‑M2/113‑116 (MQ=255) tctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAaga < 7:112470‑M2/4‑1 (MQ=255) aattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCg < 8:104482‑M2/18‑1 (MQ=255) aattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCg > 7:104482‑M2/110‑127 (MQ=255) attacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGc < 4:133221‑M2/41‑1 (MQ=255) cccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTAt < 6:143640‑M2/44‑1 (MQ=255) cgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagga > 4:21384‑M2/103‑138 (MQ=255) cgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagga < 3:21384‑M2/36‑1 (MQ=255) cgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtc < 5:11832‑M2/47‑1 (MQ=255) cctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgt < 2:107323‑M2/49‑1 (MQ=255) gcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAAc > 6:69222‑M2/97‑149 (MQ=255) aactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAAccc > 5:68557‑M2/94‑148 (MQ=255) tccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc > 1:148190‑M2/91‑148 (MQ=255) atatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTaa < 3:105489‑M2/71‑1 (MQ=255) tttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagga > 4:126144‑M2/72‑107 (MQ=255) tttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagga < 3:126144‑M2/36‑1 (MQ=255) tttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGacac < 5:69222‑M2/77‑1 (MQ=255) tttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGa < 6:68557‑M2/74‑1 (MQ=255) aagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa > 1:58495‑M2/61‑148 (MQ=255) aattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCa < 4:129988‑M2/67‑1 (MQ=255) tggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCac > 5:114028‑M2/44‑148 (MQ=255) acgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACtactac < 6:114028‑M2/111‑1 (MQ=255) gactaaagtttcTAGAGAATCAGGGCTTCGCATCCCTGTCATTATGGAGGAGCTATGTCGTGAACCCTACGATAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa < 5:116352‑M2/97‑1 (MQ=255) actaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACt < 2:148190‑M2/137‑1 (MQ=255) actaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTg > 4:126615‑M2/12‑149 (MQ=255) | CTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTG > NC_000913/1335647‑1335926 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |