| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1475100 | 49 (1.630) | 4 (0.150) | 4/202 | 2.9 | 7.9% | intergenic (+19/‑44) | ydbC/ydbD | putative NAD(P)‑binding oxidoreductase/PF10971 family putative periplasmic methylglyoxal resistance protein |
| ? | NC_000913 | = 1475106 | 49 (1.790) | intergenic (+25/‑38) | ydbC/ydbD | putative NAD(P)‑binding oxidoreductase/PF10971 family putative periplasmic methylglyoxal resistance protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCGAGAATAACGAATATACAAAAGGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1475072‑1475100‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagggaaaTGCATCTTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGACAACACTTCCTCAGAAAGATGCAATTTTTCAGCAGCCATATTCTCCC < NC_000913/1475106‑1475005 GCGAGAATAACGAATATACAAAAGGGAAATGCATCTTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGA > 1:156729/1‑84GCGAGAATAACGAATATACAAAAGGGAAATGCATCTTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGA < 2:156729/84‑1 TAACGAATATACAAAAGGGAAAGATGCATTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGACAACACTTCCTCAGAAAGATGCAATTTTTCAGCAGCCATATTCTCCC < 5:104156/124‑1 TAACGAATATACAAAAGGGAAAGATGCATTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGACAACACTTCCTCAGAAAGATGCAATTTTTCAGCAGCCATATTCTCCC > 6:104156/1‑124 GCGAGAATAACGAATATACAAAAGGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1475072‑1475100‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagggaaaTGCATCTTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGACAACACTTCCTCAGAAAGATGCAATTTTTCAGCAGCCATATTCTCCC < NC_000913/1475106‑1475005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |