New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3502298 = | 34 (1.060) | 5 (0.160) | 5/248 | 3.3 | 12.2% | intergenic (+8/‑42) | frlB/frlC | fructoselysine‑6‑P‑deglycase/fructoselysine 3‑epimerase |
? | NC_000913 | 3502320 = | 38 (1.180) | intergenic (+30/‑20) | frlB/frlC | fructoselysine‑6‑P‑deglycase/fructoselysine 3‑epimerase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
AACTCCTTGCGTAAATCCGGCCCGTTGCCGGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3502334‑3502298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCC > NC_000913/3502320‑3502449 AACTCCTTGCGTAAATCCGGCCCGTTGCCGGGCCGGGTTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCC < 5:102729/98‑1 AACTCCTTGCGTAAATCCGGCCCGTTGCCGGGCCGGGTTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCC > 6:102729/1‑98 GTAAATCCGGCCCGTTGCCGGGCCGGGTTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTAC > 3:130722/1‑67 GTAAATCCGGCCCGTTGCCGGGCCGGGTTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTAC < 4:130722/67‑1 GGCCCGTTACCGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCC > 8:47610/1‑149 AACTCCTTGCGTAAATCCGGCCCGTTGCCGGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3502334‑3502298 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCC > NC_000913/3502320‑3502449 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |