| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3681333 = | 65 (1.730) | 7 (0.200) | 6/228 | 3.4 | 9.5% | coding (608/1497 nt) | yhjJ | putative periplasmic M16 family chaperone |
| ? | NC_000913 | 3681360 = | 71 (1.990) | coding (581/1497 nt) | yhjJ | putative periplasmic M16 family chaperone | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAGGGTCAACCTTGTTAGGTCACGATCCTGCCGATCCGCTGAAACAACCCGTTGAAGCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3681394‑3681333‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggaTCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTG > NC_000913/3681360‑3681506 AAAGGGTCAACCTTGTTAGGTCACGATCCTGCCGATCCGCTGAAACAACCCGTTGAAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTA < 1:143957/125‑1AAAGGGTCAACCTTGTTAGGTCACGATCCTGCCGATCCGCTGAAACAACCCGTTGAAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTA > 2:143957/1‑125 GATCCGCTGAAACAACCCGTTGAAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTT > 5:107189/1‑149 ATCCGCTGAAACAACCCGTTGAAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCG < 8:16686/97‑1 CGCTGAAACAACCCGTTGAAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTG > 4:608/1‑149 GCTGAAACAACCCGTTGAAGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTA < 3:154250/87‑1 GCTGAAACAACCCGTTGAAGCGGATCGGCAGGATCGTGACCTAACAAGGTAGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTA > 4:154250/1‑87 AGCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGC > 3:149959/1‑148 GCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCA < 7:93595/93‑1 GCGGATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCA > 8:93595/1‑93 GATCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTG > 4:32735/1‑149 AAAGGGTCAACCTTGTTAGGTCACGATCCTGCCGATCCGCTGAAACAACCCGTTGAAGCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3681394‑3681333‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggaTCGGCAGGATCGTGACCTAACAAGGTTGACCCTTTCAGACGATAGCGCCACCAGCCCTCTTTAGTATCGGCAGGCCAGGTTGCCACCATGTCCTGACTTTGCAGCGCGTGGTTGATGGTTTCTGGTGTGATGGTCAATTTGCCAGTG > NC_000913/3681360‑3681506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |