| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3262180 = | 85 (0.880) | 4 (0.040) | 4/252 | 11.4 | 4.8% | coding (239/2295 nt) | tdcE | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase |
| ? | NC_000913 | 3262220 = | 80 (0.890) | coding (199/2295 nt) | tdcE | pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTAATGTCCGCGATTTTATTCAACATAACTATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3262336‑3262180‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcgatacGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAG > NC_000913/3262220‑3262365 aTAATGGCCGCGATTTTATTCAACATAACTATACACCGTATGAAGGAGATGAATCTTTCCTCGCCGAAGCGTCGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGAT < 4:315613/148‑1TTAATGTCCGCGATTTTATTCAACATAACTATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGAT < 8:360777/149‑1 TCCGCGATTTTATTCAACATAACTATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGA < 5:323439/148‑1 CGCGATTTTATTCAACATAACTATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGA > 5:125279/1‑146 CGCGATTTTATTCAACATAACTATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGA < 6:125279/146‑1 ATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGAT < 7:325195/125‑1 ATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGAT > 8:325195/1‑125 GGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGATACGGATGCCGTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTC > 5:217350/1‑123 GGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGATACGGATGCCCTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTC < 6:217350/123‑1 TCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATA > 3:134068/1‑131 TCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATA < 4:134068/131‑1 TTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTT > 3:254395/1‑134 TTCGATACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTT < 4:254395/134‑1 CGATACGTATGCCTTCCATTACTTTTTCCCACAATTCCGTTGTGGCAGGCGTCGCTTCGGCGAGTAAAGATTCATCGCCTTCATACGGTGTATAGGTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTT < 5:10961/148‑1 GATACGGATGCCCTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTA < 6:408848/148‑1 TACGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAG > 6:402014/1‑149 TTAATGTCCGCGATTTTATTCAACATAACTATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3262336‑3262180‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttcgatacGGATGCCTTCCATTACTTTTTCCCACAATTCCGTGGTGGCAGGCGTCGCTTCGGCGAGGAAAGATTCATCGCCTTCATACGGTGTATAGTTATGTTGAATAAAATCGCGGACATTAATTTCGTTTTTCCAGTCCGTACCTTTAAAG > NC_000913/3262220‑3262365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |