| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4406040 = | 37 (1.020) | 6 (0.180) | 6/222 | 2.3 | 16.0% | intergenic (+55/‑150) | purA/nsrR | adenylosuccinate synthetase/nitric oxide‑sensitive repressor for NO regulon |
| ? | NC_000913 | 4406075 = | 29 (0.870) | intergenic (+90/‑115) | purA/nsrR | adenylosuccinate synthetase/nitric oxide‑sensitive repressor for NO regulon | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATTGAAGAGCTGACTGGTGTGCCGATCGATATCATCTCTACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCAATATAAATGTATTTTTTCCCGATTTCCCTTTTGAGG > NC_000913/4405893‑4406184 | aatccgtaatcagtgaaactcgttaactgcacaacaaccacaaaacgcaaatcgggaaaaaatacatttatattgatcataaaccaaccacaagctgtgtccctaatttatttcagtacggggaagcaaaaaaccaagcatttaacaCt < 7:130148‑M1/2‑1 (MQ=255) atcagtgaaactcgttaactgcacatcaacctcaaaagggaaatcgggaaaaaatacatttatattgatgataaaccagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTCgg > 6:18210‑M1/140‑148 (MQ=255) tgCCGATCGATATCATCTCTTCCGGTCCTGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACTCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTAc < 3:116836/149‑1 (MQ=255) atatCATCTCTACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTAc < 6:12327/140‑1 (MQ=255) atatCATCTCTACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTAc > 5:12327/1‑140 (MQ=255) atcaacctcaaaagggaaatcgggaaaaaatacatttatattgatgataaaccagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTCGGGTAAGCCATTACGCTATCCGac > 1:34056‑M1/116‑146 (MQ=255) atcaacctcaaaagggaaatcgggaaaaaatacatttatattgatgataaaccagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTCGGGTAAGCCATTACGCTATCCGac < 2:34056‑M1/31‑1 (MQ=255) atcTCTACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTa < 1:12516/134‑1 (MQ=255) atcTCTACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTa > 2:12516/1‑134 (MQ=255) ctctACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTaa < 3:131695/125‑1 (MQ=255) ctctACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTaa > 4:131695/1‑125 (MQ=255) tACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTTGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTCAGCCATTACGCTATCCGACACAgtgt < 3:9040/147‑1 (MQ=255) tACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGACGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGtt > 3:61247/1‑148 (MQ=255) tcaaaagggaaatcgggaaaaaatacatttatattgatgataaaccagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTc > 3:160077‑M1/109‑115 (MQ=255) tcaaaagggaaatcgggaaaaaatacatttatattgatgataaaccagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTc < 4:160077‑M1/7‑1 (MQ=255) aCCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTa > 7:163348/1‑148 (MQ=255) aCCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCGGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTACGCCATTACGCTATCCGACACAGTGTTa > 7:161146/1‑148 (MQ=255) cGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGGCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTc < 4:61247/148‑1 (MQ=255) cTGAAACCATGATTCTGCGCGACCCGTTCGCCGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTttcc > 5:117821/1‑149 (MQ=255) aCCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATc < 6:111814/114‑1 (MQ=255) aCCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATc > 5:111814/1‑114 (MQ=255) cATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGc > 4:26911/1‑108 (MQ=255) cATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGc < 3:26911/108‑1 (MQ=255) aTGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGaca > 5:89283/1‑116 (MQ=255) aTGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGaca < 6:89283/116‑1 (MQ=255) ttatattgatgataaaccagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTCGGGTAAGCCATTACGCTATCCGACACAg > 7:3093‑M1/81‑115 (MQ=255) ttatattgatgataaaccagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTCGGGTAAGCCATTACGCTATCCGACACAg < 8:3093‑M1/35‑1 (MQ=255) tGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGc > 4:125898/1‑92 (MQ=255) tGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGc < 3:125898/92‑1 (MQ=255) tGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGaaa > 4:117211/1‑149 (MQ=255) aaccGGTCGCCGCGTAATTCTGGTACGCCTGGCATATATTTTTCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAAtt < 8:161146/147‑1 (MQ=255) aCCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGGGATACATTGCTGGGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAAtt < 8:163348/149‑1 (MQ=255) cagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTCGGGTAAGCCATTACGCTATCCGACACAgt > 2:56546‑M1/64‑99 (MQ=255) cagccacaagctgtgtcgctaatttatttcagttcggggaaggaaaaaagcgaggatttaacaCTGTGTCGGGTAAGCCATTACGCTATCCGACACAgt < 1:56546‑M1/36‑1 (MQ=255) gTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGc > 7:62133/1‑139 (MQ=255) gTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGc < 8:62133/139‑1 (MQ=255) aCGCCTGGCAGATATTTTGCCTGCCGGGTGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGtt > 3:109749/1‑148 (MQ=255) gCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTat > 7:15066/1‑149 (MQ=255) aGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCaa > 7:3973/1‑148 (MQ=255) atatTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCAatat < 8:3973/149‑1 (MQ=255) atatTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCAata > 8:16299/1‑148 (MQ=255) tgccGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTAc < 7:69367/47‑1 (MQ=255) tgccGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTAc > 8:69367/1‑47 (MQ=255) tgtgATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCAATATAAATGTATTTTTTCCCGAtt > 8:84790/1‑145 (MQ=255) tgtgATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCAATATAAATGTATTTTTTCCCGAtt < 7:84790/145‑1 (MQ=255) aTTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCAATATAAATGTATTTTTTCCCGATTTCCCTTTTGAgg < 6:117821/149‑1 (MQ=255) aTTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCAATATAAATGTATTTTTTCCCGATTTCCCTTTTGAgg > 3:54464/1‑149 (MQ=255) | ATTGAAGAGCTGACTGGTGTGCCGATCGATATCATCTCTACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAATTCTGGTACGCCTGGCAGATATTTTGCCTGCCGGGCGAACAGTGTGATACATTGCTGTGTCGGGTAAGCCATTACGCTATCCGACACAGTGTTAAATCCTCGCTTTTTTCCTTCCCCGAACTGAAATAAATTAGCGACACAGCTTGTGGCTGGTTTATCATCAATATAAATGTATTTTTTCCCGATTTCCCTTTTGAGG > NC_000913/4405893‑4406184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |