Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 758,061 G→T G125* (GGA→TGA)  sdhB → succinate dehydrogenase, FeS subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913758,0610GT100.0% 168.4 / NA 48G125* (GGA→TGA) sdhBsuccinate dehydrogenase, FeS subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (25/23);  total (25/23)

CCCCGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATGGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCTGGTGGAATCCCGATAAGTTTATCGG  >  NC_000913/757918‑758200
                                                                                                                                               |                                                                                                                                           
ccccGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACa                                                                                                                                         >  5:2840/1‑148 (MQ=255)
 cccGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACaa                                                                                                                                        >  1:58187/1‑148 (MQ=255)
 cccGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACaa                                                                                                                                        >  2:157044/1‑148 (MQ=255)
  ccGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGa                                                                                                                                           <  1:153073/144‑1 (MQ=255)
  ccGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGa                                                                                                                                           >  2:153073/1‑144 (MQ=255)
  ccGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACaaaa                                                                                                                                      <  2:58187/149‑1 (MQ=255)
          ggCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCg                                                                                                                                  >  1:5165/1‑145 (MQ=255)
          ggCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCg                                                                                                                                  <  2:5165/145‑1 (MQ=255)
                          ggCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACa                                                                                                              <  1:110277/149‑1 (MQ=255)
                               gaagaTTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGc                                                                                                         <  6:2840/149‑1 (MQ=255)
                                    ttGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCagag                                                                                                    <  1:157044/149‑1 (MQ=255)
                                          ttCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAgcgc                                                                                              <  2:151817/149‑1 (MQ=255)
                                                     ccAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTAc                                                                                                               <  6:56021/121‑1 (MQ=255)
                                                     ccAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTAc                                                                                                               >  5:56021/1‑121 (MQ=255)
                                                         gTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACggg                                                                               >  1:169631/1‑149 (MQ=255)
                                                                ggTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCa                                                                                                       <  7:34276/118‑1 (MQ=255)
                                                                ggTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCa                                                                                                       >  8:34276/1‑118 (MQ=255)
                                                                      ccGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTa                                                                  >  6:168685/1‑149 (MQ=255)
                                                                       cgcgATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAg                                                                                                             >  3:92400/1‑105 (MQ=255)
                                                                       cgcgATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAg                                                                                                             <  4:92400/105‑1 (MQ=255)
                                                                        gcgATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTAtt                                                                <  2:169631/149‑1 (MQ=255)
                                                                          gATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCt                                                                             >  3:118722/1‑134 (MQ=255)
                                                                          gATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCt                                                                             <  4:118722/134‑1 (MQ=255)
                                                                                   gtAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGAt                                                                                                           <  2:63687/95‑1 (MQ=255)
                                                                                   gtAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGAt                                                                                                           >  1:63687/1‑95 (MQ=255)
                                                                                         aTGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATgttgtt                                                >  3:62129/1‑148 (MQ=255)
                                                                                           gggACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCaa                                             >  2:119694/1‑149 (MQ=255)
                                                                                           gggACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCACCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCAtgt                                                    >  2:120383/1‑142 (MQ=255)
                                                                                           gggACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCACCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCAtgt                                                    <  1:120383/142‑1 (MQ=255)
                                                                                            ggACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGaaaaa                                                                                        <  7:114370/105‑1 (MQ=255)
                                                                                            ggACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGaaaaa                                                                                        >  8:114370/1‑105 (MQ=255)
                                                                                            ggACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAAc                                            >  3:138939/1‑149 (MQ=255)
                                                                                                aaTTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTcgc                                                                                                                         <  5:132981/68‑1 (MQ=255)
                                                                                                aaTTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTcgc                                                                                                                         >  6:132981/1‑68 (MQ=255)
                                                                                                 aTTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCtt                                       >  1:86828/1‑149 (MQ=255)
                                                                                                         cgcAATATGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCt                               >  2:52386/1‑149 (MQ=255)
                                                                                                             atatGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCt                           <  1:52386/149‑1 (MQ=255)
                                                                                                                tGAGAAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCtggt                        >  1:43959/1‑149 (MQ=255)
                                                                                                                 gagaAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTctct                                                            <  4:34160/112‑1 (MQ=255)
                                                                                                                 gagaAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTctct                                                            >  3:34160/1‑112 (MQ=255)
                                                                                                                  agaAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCtggtg                       <  7:73438/148‑1 (MQ=255)
                                                                                                                  agaAAATTAAGCCTTACCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCtggtg                       >  8:73438/1‑148 (MQ=255)
                                                                                                                                 aCCTGTTGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCTGGTGGAATCCCGATAAGt         <  1:119694/147‑1 (MQ=255)
                                                                                                                                      ttGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAAc                                                                                       >  6:526/1‑64 (MQ=255)
                                                                                                                                      ttGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAAc                                                                                       <  5:526/64‑1 (MQ=255)
                                                                                                                                      ttGAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCTGGTGGAATCCCGATAAGTTTATCgg  <  4:62129/149‑1 (MQ=255)
                                                                                                                                        gAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTAt                                                                         <  6:147276/76‑1 (MQ=255)
                                                                                                                                        gAATAATTGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTAt                                                                         >  5:147276/1‑76 (MQ=255)
                                                                                                                                               |                                                                                                                                           
CCCCGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATGGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCTGGTGGAATCCCGATAAGTTTATCGG  >  NC_000913/757918‑758200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: