New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39860833 (1.020)5 (0.160) 5/240 3.4 13.9% coding (737/1095 nt) yaiW microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein
?NC_000913 = 398612 31 (1.010)coding (741/1095 nt) yaiW microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/398462‑398608
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgttCTGAAACGCGGCATTACGGCTGGCGTACCAGCCAGCGTTAAAATCAGCAAAACGGTATATCGGTGCGCTATAACTGGCGGGATAATTCAGTAAATGGTAAGTACCAAACCACAACCCGCCGCGGCGACTGAAGACTT  <  NC_000913/398612‑398476
                                                                                                                                                                                                                                                                                            
TACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACCATGGATGTAACGCAAGCCGAAATCCCCCGTT                                                                                                                                           >  1:164098/1‑147
              AAGTCTTCAGTCGCCGCGGCGGGCTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTCTGAAACGCGGCATTA                                                                                                                           <  4:100284/149‑1
                                  GGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGC                                                                                                                                                 <  7:30501/107‑1
                                  GGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGC                                                                                                                                                 >  8:30501/1‑107
                                                            ACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTCTGAAACGCGGCATTACGGCTGGCGTACCAGCCAGCGTTAAA                                                                                                 >  7:19127/1‑129
                                                            ACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTCTGAAACGCGGCATTACGGCTGGCGTACCAGCCAGCGTTAAA                                                                                                 <  8:19127/129‑1
                                                                                                       GCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTCTGAAACGCGGCATTACGGCTGGCGTACCAGCCAGCGTTAAAATCAGCAAAACGGTATATCGGTGCGCTATAACTGGCGGGATAATTCAGTAAATGGTAAGTAC                                   >  4:1851/1‑148
                                                                                                                                       TAATGCCGCGTTCTGAAACGCGGCATTACGGCTGGCGTACCAGCCAGCGTTAAAATCAGCAAAACGGTATATCGGTGCGCTATAACTGGCGGGATAATTCAGTAAATGGTAAGTACCAAACCACAACCCGCCGCGGCGACTGAAGACTT  <  3:1851/149‑1
                                                                                                                                             CGCGTTCTGAAACGCGGCATTACGGCTGGCGTACCAGCCAGCGTTAAAATCAGCAAAACGGT                                                                                   <  1:116119/62‑1
                                                                                                                                             CGCGTTCTGAAACGCGGCATTACGGCTGGCGTACCAGCCAGCGTTAAAATCAGCAAAACGGT                                                                                   >  2:116119/1‑62
                                                                                                                                                                                                                                                                                            
TACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/398462‑398608
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgttCTGAAACGCGGCATTACGGCTGGCGTACCAGCCAGCGTTAAAATCAGCAAAACGGTATATCGGTGCGCTATAACTGGCGGGATAATTCAGTAAATGGTAAGTACCAAACCACAACCCGCCGCGGCGACTGAAGACTT  <  NC_000913/398612‑398476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.