New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3251393	146 (0.770)	3 (0.020)	3/464	NT	1.5%	coding (370/987 nt)	yqjG	putative S‑transferase
	?	NC_000913	= 3251598	257 (1.390)					coding (575/987 nt)	yqjG	putative S‑transferase
Rejected: Frequency below/above cutoff threshold.

CGCATTTCGTAACTGGCTCACTGCCGATGGCGCTCCTGGCCCCACTGGCACAGGCGGTTTTATCGCAGAGAAAGATCGTTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3251107‑3251393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgccgTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAACTGTCATC  <  NC_000913/3251598‑3251318                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCAGTTCGTCACCGGCTCACGGCCGAGGGCGCTCCTGGCCCCACTGGCACAGGCGGTTTTATCGCAGAGAAATATCGTTATCATCTCTTTGTTTCACTCGCCGGCCCGTGGGCGCACCGCACGTTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCA                                                                                                                                                                                                                                                                                                <  2:1570948/282‑1   CATTTCGTAACTGGCTCACTGCCGATGGCGCTCCTGGCCCCACTGGCACAGGCGGTTTTATCGCAGAGAAAGATCGTTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCTGGAGCACCCGGCGACACGCCATATCAAAATGATTTTCTGGATCCGCTTTTTCTCCcc                                                                                                                                                                                                                                                                                               >  2:170565/1‑279      TTCTTAACTGGCGAACGGCCCGTGGCGCTCCGGGCCCCACCGGCACAGGCGGTTTTATCGCAGAGAAAGATCGTTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCCG                                                                                                                                                                                                                                                                                           <  2:1517867/282‑1      TTCGTAACTGGCTCACTGCCGATGGCGCTCCTGGCCCCACTGGCACAGGCGGTTTTATCGCAGAGAAAGATCGTTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCCG                                                                                                                                                                                                                                                                                           <  1:432673/282‑1                                                                               TTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACG                                                                                                                                                                                                                                                                                              <  2:2003548/206‑1                                                                               TTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACG                                                                                                                                                                                                                                                                                              >  1:2003548/1‑206                                                                                                                          ACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACG                                                                                                                                                                                                                                                                                              >  1:883170/1‑163                                                                                                                          ACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACG                                                                                                                                                                                                                                                                                              <  2:883170/163‑1                                                                                                                                        CAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCC                                                                                                                                                                                                                                                                                            <  2:816872/151‑1                                                                                                                                        CAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCC                                                                                                                                                                                                                                                                                            >  1:816872/1‑151                                                                                                                                                                                          TGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCTGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTA‑‑TACACGCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGT                                                                                                     <  1:1981856/282‑1                                                                                                                                                                                                                    GATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTG                                                                                        >  1:392114/1‑271                                                                                                                                                                                                                    GATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTG                                                                                        <  2:392114/271‑1                                                                                                                                                                                                                                                                                          ACGCCGTTGTTAACGGTGGCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTGGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAA          <  1:553908/279‑1                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAACTGTC     >  1:102425/1‑282                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAACTGTC     >  2:401256/1‑282                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAACTGTC     >  1:1474530/1‑282                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAACTGTC     >  1:101742/1‑282                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCAC                                                                                                                   <  1:280621/172‑1                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCAC                                                                                                                   >  2:280621/1‑172                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCACACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGGTGATACAGAAAATCATTTTGATAGCGCGTGTCTCCGGTTGCTCGCGGAAAACTGTC     >  2:1677484/1‑282                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTT                                                                                                                            <  2:553845/163‑1                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTT                                                                                                                            >  1:553845/1‑163                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCG                                                                                                                                                    <  2:1263114/139‑1                                                                                                                                                                                                                                                                                            GCCGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCG                                                                                                                                                    >  1:1263114/1‑139                                                                                                                                                                                                                                                                                              CGTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAACTGTCA    >  1:799869/1‑281                                                                                                                                                                                                                                                                                               GTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAACTGTCATC  <  1:888679/282‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCATTTCGTAACTGGCTCACTGCCGATGGCGCTCCTGGCCCCACTGGCACAGGCGGTTTTATCGCAGAGAAAGATCGTTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3251107‑3251393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgccgTTGTTAACGGTGTCATAAATCCAGCCGTTAAGTTCGTCAATTTTTGTTTGCAGGGCTGGAGGGTAGTAATCACCCGCTTTCGCGCCCAGCGCATCAAACGCGGTATTGAACATGCGGATGATTTCTGCTGATTCGTTGCTGACGATGGTGTGGTTCTTTTTGTCCCACAGCACGGGAACAGTAACTCGTCCGCTGTAGTGTGGATCGGCGTGGAGATAAAGCTGATACAGAAATTCATTTTGATAGAGCGTGTCTCCGGTTGCTCCCGGAAAACTGTCATC  <  NC_000913/3251598‑3251318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.