New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1049778 =	NA (NA)	18 (0.090)	3/478	NT	25.7%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 4507639	52 (0.270)					noncoding (1041/1221 nt)	IS30	repeat region

TCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGAGTCTAAGGATGATCGTATAACGTGATTTTCGGTCTACAAGTGTGGCTATATGAGAGTTTTTTGTACCTGAGACTAAATCGCCCTCCCAA  >  NC_000913/4507368‑4507919                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                         tctcCTATAACACCACAACAAATCGAAACACGTAAGCTGAGGAAAAAGCTACAACGGATTGAATTGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACACCTTACAATTATCTCTTTCGGTTTTTTGAACTTCAGCGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATATAGTTAATGTTGAGTATATTGGGCACGCGAGGTCTTTTTAGGCAAGTACTGCCGATTTAGTCCATTTGTGTTCTCATTTGTTccc                                                                                                                                                                                                                                                                                >  2:1698740/1‑282 (MQ=18) tctcCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTccc                                                                                                                                                                                                                                                                                >  2:569306/1‑282 (MQ=255)   tcCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCg                                                                                                                                                                                                                                                                              <  1:1774386/282‑1 (MQ=255)          acacCAGAACAAATCTAAAAACGGAAGCTGAGGAAAAAGGTACAACGGATTGAAAAGTAGAATGAAATATTCAAAAGGCTACTGTAGGTTCTATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGGCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAATTAATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGGCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCaa                                                                                                                                                                                                                                                                       <  2:1031671/282‑1 (MQ=17)          acacCAGAACAAATCGAAATCCGGAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCACTGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCGAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCaa                                                                                                                                                                                                                                                                       <  1:1692842/282‑1 (MQ=255)          acacCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATTTTGGGCAAGAGATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCAATTTGTGTTCTCATTTGTTCCTCGCTGc                                                                                                                                                                                                                                                                          >  1:699839/1‑279 (MQ=255)           cacCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAg                                                                                                                                                                                                                                                                      <  2:11013/282‑1 (MQ=255)                      aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACTCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGATCTGTTGTTTAGCTGAGCATCAAACCGCTCTAGCTCTTGTTGAGTAAATTGGGCAAGAAATGTTTTTTTAGGAAAGGACTGCCGAATTAACCCATTTGTGTTCTCTTTTGTTCCCAGCTGCCAAGTACTCTGAGGa                                                                                                                                                                                                                                                           >  2:1890109/1‑282 (MQ=18)                      aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTTTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGa                                                                                                                                                                                                                                                           >  1:1294159/1‑282 (MQ=255)                      aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACAAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGa                                                                                                                                                                                                                                                           >  1:1891209/1‑282 (MQ=255)                         gAAATAAGTAAGCTAAGGAAAAAGTTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTGAATGCAACACCCCTTTCAATTATCGCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGCCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCg                                                                                                                                                                                                                                                        <  2:200929/282‑1 (MQ=255)                            aTACGTAAACTGAGGAAAAAGCTACCACGGATTGAAAATGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTGTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATAGTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAg                                                                                                                                                                                                                                                     <  2:1476995/282‑1 (MQ=255)                                 tAAGCTGGGGAAAAAGCTACAAAGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTATTTCGGTTTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTATAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTa                                                                                                                                                                                                                                                <  2:1879613/282‑1 (MQ=255)                                  aaGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTccc                                                                                                                                                                                                                                                                                <  1:1006026/249‑1 (MQ=255)                                  aaGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTccc                                                                                                                                                                                                                                                                                >  2:1006026/1‑249 (MQ=255)                                  aaGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTa                                                                                                                                                                                                                                                <  1:214862/281‑1 (MQ=255)                                     cTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAAc                                                                                                                                                                                                                                             >  1:28690/1‑281 (MQ=255)                                        aGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTa                                                                                                                                                                                                                                         >  2:326272/1‑282 (MQ=255)                                        aGGAAAAAGCTAAAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTATTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACAGCAGAATTAGCCAATTTGTATTCTCATTTATTCCCAGCTGCCAAGGACTCTGAGGATCGCCGAAGTAAACTTTa                                                                                                                                                                                                                                         >  2:1851868/1‑282 (MQ=255)                                          gAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTACATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTaa                                                                                                                                                                                                                                        >  2:1087180/1‑281 (MQ=255)                                             aaaGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGc                                                                                                                                                                                                                                     <  2:1294159/281‑1 (MQ=255)                                               aGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCg                                                                                                                                                                                                                                                        >  2:1652403/1‑260 (MQ=255)                                               aGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCg                                                                                                                                                                                                                                                        <  1:1652403/260‑1 (MQ=255)                                                    cAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCGCTTTCGGTATTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCCAGTTCATGTTGACTATATTGGGCAAGACATGTCTTTTTAGGAAAGTAATGCCGAATTAGCCCAATTGTGTTCTCATTTGATCCCCGCTGCCAAGGACTCTGAGGATAGCGGAAGTAAACTTTAACGCCGGTGCTg                                                                                                                                                                                                                             >  1:1329243/1‑282 (MQ=255)                                                         gagtGAAATGTCGAATGCAATATTAAAAAGGGTACGGTACATTCAAACTGTCAAGGCAAAACCCCTTTGAATTATCTCTTTCGGTGTGTTGAACTTCAGTTTCTTTCTCGGGCTGTTGTTTATCTGGGCAGTCACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGt                                                                                                                                                                                                                        <  2:1872435/279‑1 (MQ=11)                                                          aTTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTa                                                                                                                                                                                                                       <  1:325171/282‑1 (MQ=255)                                                          aTTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTACCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTa                                                                                                                                                                                                                       <  2:160817/282‑1 (MQ=255)                                                          aTTGAAAAGAAGAATTAAATAATAAAAAGGCTACTGTAGATTCAATCTATCAATAGAACACCCCTTTCGATTGTCTCTTTCGGGGTTTTGAACTTGAGTGTCTTTCTCGGTCTGTTGATTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTa                                                                                                                                                                                                                       <  2:1636061/282‑1 (MQ=11)                                                                  ggAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTATTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTa                                                                                                                                                                                                                <  1:627870/281‑1 (MQ=255)                                                                  ggAGAATGAAATAGTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCCATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGGCATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTGCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTa                                                                                                                                                                                                                <  1:1644043/281‑1 (MQ=255)                                                                   gagaATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGAAGAAGTAAACTTTAACCCGGGTGCTTACAGTAAATTCTAg                                                                                                                                                                                                               >  2:1361709/1‑281 (MQ=255)                                                                    agaATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGa                                                                                                                                                                                                              >  1:403898/1‑281 (MQ=39)                                                                      aaTGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGt                                                                                                                                                                                                           >  1:740404/1‑282 (MQ=38)                                                                            atatTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGc                                                                                                                                                                                                      <  1:1154603/281‑1 (MQ=35)                                                                            atatTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAAGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGc                                                                                                                                                                                                      <  1:976439/281‑1 (MQ=25)                                                                             tatTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTTTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTCGTTCATGTTGAGTATATTGGGCAAGACATGTC‑TTTTAGTAAAGTACTGCTGAATTCGCCCCTTTGGGTTCTCATTTGTTCCCCGCTGCCAAGAACTCTGAGGATCGCAGAAGTAAACTTTAACGACGGTGCTGACAGTAACTTCTAGCTGTCTGGCCa                                                                                                                                                                                                    >  1:994043/1‑281 (MQ=11)                                                                              atTAAAAAGGCTACTTTAGAGTCAATCTGTCAATGCAAAACCCCTTTCAATTATCTCTTTCGGTGTTTTTAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGTCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAg                                                                                                                                                                                                   <  2:1772413/282‑1 (MQ=19)                                                                              atTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGcc                                                                                                                                                                                                     <  2:28690/280‑1 (MQ=35)                                                                              atTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAg                                                                                                                                                                                                   <  2:475896/282‑1 (MQ=35)                                                                              atTAAAAAAGTTACTGTGGATTCAAGCTGTCAATGAATCAACCCTTTCAATTATCTCTTTCGGTTGTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGGTTAGCTGAGCAGCAACCTGAACTAGTTCATGTTTCGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAAGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAg                                                                                                                                                                                                   <  2:626507/282‑1 (MQ=11)                                                                                  aaaaGGCTACTGTAGATTCAATCTGTCAATGCAACACACCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGAAGCAACTAGCTCTAGTTCATGTTGAGTATATTGTGCAAGACATGTCTTTTTAGGAAAGTACTGCCGACTTAGCACATTTGCGTTCTCATTTGTTCCACGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCAGGTTCTGACAGTAAATTCTAGATGTCTGGCCattacc                                                                                                                                                                                               >  2:1179496/1‑277 (MQ=11)                                                                                  aaaaGGCGACTGTTCATTCAACCTTGCAATGCACCACCCCTTTCACTTATCTCTTTGGTTTTTTTTAACTTCAGTTTCTTTTTCGGTCTATTGTTTTGCTGAGCAGCAACCAGTTCTAGTTCATGTTGAGTATATTTGGCAAGACATGGC‑TTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGTTGATCGCATCAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCa                                                                                                                                                                                              <  2:994043/282‑1 (MQ=11)                                                                                   aaaGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTACATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCa                                                                                                                                                                                              <  1:1087180/282‑1 (MQ=18)                                                                                       gctgcttgagatttcatCCGTAAATGCAACACCCCTTTTATCTGTATCTGTCGGTGTTTTGAACTTCAGTGGCGTTCTCGGTCTGTTGGTGAGCTGAGCAGCAACCATATCGAGGTAATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGTGAGTACTGCCGAATTAGCCCATTGGTGTTCTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggttctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                                                                                                                                                                          >  2:1997009‑M2/9‑186 (MQ=255)                                                                                       gCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTc                                                                                                                                                                                           >  1:1324747/1‑281 (MQ=31)                                                                                        cTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCct                                                                                                                                                                                         <  2:1471440/282‑1 (MQ=31)                                                                                        cTACTGGAGTTTCCATCTGTCAATGCAACACCCCTTTCAATTATCTCGTTCGGTGTTGTGAACTTCAGTGTCTTTTTCGGTCGGTTGGTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTTAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTATCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACTGTAAATTCTAGATGTCTGGCCAGTTCCATTCct                                                                                                                                                                                         <  2:23474/282‑1 (MQ=11)                                                                                         tccTGTAGATTCCATCTGTCAATGCAACACCCCCTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCATCAACCAGATCTAGCTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCAGTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGGTCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCctc                                                                                                                                                                                        <  1:1329668/280‑1 (MQ=2)                                                                                                        cTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaactta                                                                                                                                                                                                                                                                        <  1:1143358‑M2/187‑19 (MQ=255)                                                                                                        cTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaactta                                                                                                                                                                                                                                                                        >  2:1143358‑M2/1‑169 (MQ=255)                                                                                                           tCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgattt                                                                                                                                                                                                                                                                 <  1:515279‑M2/191‑26 (MQ=255)                                                                                                           tCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgattt                                                                                                                                                                                                                                                                 >  2:515279‑M2/1‑166 (MQ=255)                                                                                                                     acCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgatt                                                                                                                                                                                                                                                                  <  1:40016‑M2/180‑25 (MQ=255)                                                                                                                     acCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgatt                                                                                                                                                                                                                                                                  >  2:40016‑M2/1‑156 (MQ=255)                                                                                                                                                         cAGTGTCTTTCTCGGTCTGTTGTTTAGCTGGGCAGCAACCAAATCTCGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTTTTCGCggtgatgccgccaacttactgatttagtgtatgatgctgtttttgaggttctccagtggtttctttttctatcagacgtccctcctgttcagctactgccggggtggttgttaacggctaaagcattgccggcaccactcgctatctctgccttcaccgcct                                                                                                                        <  2:1963846‑M2/282‑163 (MQ=255)                                                                                                                                                                 ttCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgatt                                                                                                                                                                                                                                                                  >  1:639432‑M2/1‑112 (MQ=255)                                                                                                                                                                 ttCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgatt                                                                                                                                                                                                                                                                  <  2:639432‑M2/136‑25 (MQ=255)                                                                                                                                                                      ggTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgatt                                                                                                                                                                                                                                                                  <  1:1859655‑M2/131‑25 (MQ=255)                                                                                                                                                                      ggTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgatt                                                                                                                                                                                                                                                                  >  2:1859655‑M2/1‑107 (MQ=255)                                                                                                                                                                                    cttagcagcAACCAAATCTAGTTCATGTTGAGTAGAATGGGCAAGACATGTTATGTGAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCAATTATTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACTCCGGTGCGGACAGTAAATTCTGGATGTCTGGCCAGTTCCATTCCTCAGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGATACAGAATCTTGGccccg                                                                                             <  2:835351/279‑2 (MQ=1)                                                                                                                                                                                        tgagaaaCCAGATCTAGTTTATGTTGAGTATATTGGTCAAGAAATGTTTTTTTCTGAAATTGCTGCCCAATTAGCCCATTTGTGTTCTCCTCTGTTCCCCTCTGCCTAGTACGCTGAGGTTCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGCTGTCTAGCCAGTTTCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCACGAACTTGTCGGTCAGCGCTTGATTTACTGAGACAGAATCTTTGCCCCCGAGt                                                                                         <  2:398090/277‑1 (MQ=1)                                                                                                                                                                                            caACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaactta                                                                                                                                                                                                                                                                        <  2:614755‑M2/103‑19 (MQ=255)                                                                                                                                                                                            caACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaactta                                                                                                                                                                                                                                                                        >  1:614755‑M2/1‑85 (MQ=255)                                                                                                                                                                                                        gTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgatttagtgtatga                                                                                                                                                                                                                                                        <  1:1416785‑M2/107‑35 (MQ=255)                                                                                                                                                                                                        gTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgccaacttactgatttagtgtatga                                                                                                                                                                                                                                                        >  2:1416785‑M2/1‑73 (MQ=255)                                                                                                                                                                                                          tcctGTTGATGATATTGGGCAATACATGTCTTTTTAGGAAAGTACTGCCGAATTCGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCAGGAATTTGTCGGTAAGAGc                                                                                                                           <  2:1170575/227‑1 (MQ=0)                                                                                                                                                                                                             tGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCggtgatgctgctaacttactgatttagtgtaagatggagtttttgacgttctccagtggcttctgtttctatccgctgtccctcctgttcagctactgacggggtcgtccgtaacggcaacagcactgcccgacagcaacgctatctctgctcgtacttcggtaaaaccttgcaacgccccttcccttacactgctcctcaacccggtaaccac                                                                    <  2:1939836‑M2/282‑215 (MQ=255)                                                                                                                                                                                                                   ggttttttggCAAGACATGTCTTTTTACGAAAGTACTGCCGAATTAGCCCATTGTTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTTGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGAGTCTAAGGATGATCGTATAACGTGAtttt                                                              <  2:1016308/274‑1 (MQ=0)                                                                                                                                                                                                                     atgttGGGCAAGACACGTCTTTTGATGTACATACTGCCGAATTAGCCCATTTGTGTTCCCATTTGTGCCCCGCTGCCAAGGACTCTGACGATCGCGGAAGTAAACTTTAACGCCGGTGCTGACAGTAAAATCTAGATGTCTCGCTAGTTCCATTCCTCTGTCCCACGTCAGTGATTATCTGAGTTCTGACGGTAAACTCAGGAACTTGTCGGTAAGAGCCTGATTTACTTATACAGAATCTTTGCCCCTGAGTCTCAGGATGATCGTATAACGTGATTTTCg                                                            <  2:1886005/279‑1 (MQ=1)                                                                                                                                                                                                                                                                   acaTTTGTGGTCTCggtgattctggcaacttactgatttggtgcatggtggtgtttttgaggttcttcagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggttcgtaacggcaaaagcactgccgaacatcagcgctatctctgcgctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcatggatatggccatgaatggcgttggatgccgggcaaccgcccg               >  2:864050‑M2/2‑14 (MQ=255)                                                                                                                                                                                                                                                                               tcggtgatgctgccaacttactgaattagtgtatgatggtgtttttgaggtgctccagtggcttctatttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcactgcaggacatcagcgctatctctgctctccctgccgtaaaacttggcaactgccgttcacttacaccgcttctccacccggtacgcaccagaaaatcattgatatggccatgaatggcgttggatgccgggcaacacaccgcattatgggcgtt  <  2:838935‑M2/282‑281 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                         TCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCCGGTGCTGACAGTAAATTCTAGATGTCTGGCCAGTTCCATTCCTCTGTCCCATGTCAGTGATTTTCTGAGTTCTGACGGTAAACTCAGGAATTTGTCGGTAAGAGCCTGATTTACTGAGACAGAATCTTTGCCCCTGAGTCTAAGGATGATCGTATAACGTGATTTTCGGTCTACAAGTGTGGCTATATGAGAGTTTTTTGTACCTGAGACTAAATCGCCCTCCCAA  >  NC_000913/4507368‑4507919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.