New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1159325 =	53 (1.170)	5 (0.120)	5/262	5.5	9.3%	intergenic (+23/+37)	ptsG/fhuE	fused glucose‑specific PTS enzymes: IIB component/IIC component/ferric‑rhodotorulic acid outer membrane transporter
	?	NC_000913	1159347 =	48 (1.140)					intergenic (+45/+15)	ptsG/fhuE	fused glucose‑specific PTS enzymes: IIB component/IIC component/ferric‑rhodotorulic acid outer membrane transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGCGTAGTGGTTGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTC  >  NC_000913/1159206‑1159488                                                                                                                                              |                                                                                                                                              ggggGTAGTGGTTGCGGGTTCGGGTGTTGAGGCGATGTGCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCtttt                                                                                                                                              <  1:241308/143‑1 (MQ=255) gggCGTAGTGGTTGCTGGTTCTGGTGTTCAGGAGATATTGACGACTATATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCtttt                                                                                                                                              <  2:802091/143‑1 (MQ=255)  ggCGTAGTGGTGGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCttttt                                                                                                                                             <  2:430016/143‑1 (MQ=255)  agCGTAGTGGTTGCTGTTGTTCGTGTTCACGCGTTTTTCGCTACTAAATCTGATAACCTGAAAACCGAGAGGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCttttt                                                                                                                                             <  2:40398/142‑1 (MQ=255)      tAGTGGTTGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACa                                                                                                                                         <  1:263958/143‑1 (MQ=255)                tGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTc                                                                                                                               >  1:731553/1‑143 (MQ=255)                      tGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGTGGTGGCTGACCACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAAtt                                                                                                                         <  1:603005/143‑1 (MQ=255)                      tGGGGTTTAGGCGATTTTCGGTACTAAAGCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAAtt                                                                                                                         <  1:83482/143‑1 (MQ=255)                        gtgtTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGa                                                                                                                       >  1:435688/1‑143 (MQ=255)                        gggtTCAGGCGCTTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGa                                                                                                                       <  2:640535/141‑1 (MQ=255)                               ggCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTCTTTTACAGGTGTCATTCAGAATTGATACCTGc                                                                                                                >  2:696568/1‑143 (MQ=255)                               cgCGATTGTCGGTGCTAGATCCGATAACCTGAACAGCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGc                                                                                                                <  2:313938/142‑1 (MQ=255)                                gCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATGCGTAAGACGTTGGGGAGACTAAGGCAGCCAAGTGGCTGCCTTTGTCACAGGTGCTATGGAGAATTGATACGTGcc                                                                                                               >  2:311639/1‑143 (MQ=255)                                 cGATGTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCg                                                                                                              <  1:114182/143‑1 (MQ=255)                                     tttCGGTACTAAATCCGATAACCTGAACACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTaa                                                                                                          >  1:527382/1‑143 (MQ=255)                                     tttCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTAACTTAACCAATGTGGTTATTCAGAATTGATAAGCGCCGGTaa                                                                                                          >  2:582198/1‑143 (MQ=255)                                         ggTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGAGTTATTCAGAATTGATACGTGCCGGTAATGCt                                                                                                      <  2:433349/143‑1 (MQ=255)                                           tACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTCATGCTGa                                                                                                    >  1:208012/1‑143 (MQ=255)                                           tACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGa                                                                                                    <  1:483543/143‑1 (MQ=255)                                           tACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGa                                                                                                    >  1:195608/1‑143 (MQ=255)                                            aCTAAATCCTATAACCTGACAACCGAGATGGATGAGTACATCCGTAACCACTAATTCGTAAGACGTTGGGGAGACTAAGGCAGTCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGaa                                                                                                   <  1:232966/143‑1 (MQ=255)                                              tAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAGAt                                                                                                 >  1:363243/1‑143 (MQ=255)                                                    cGATAACCTGAAAACCGAGATGGATGAGTAAATCCGTAACCACTAAGCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTAcgcg                                                                                           <  2:70083/143‑1 (MQ=255)                                                     gATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTAGGGGAGACTAAGGCAACCAGATGGCTGCCAGATTTAGAGGAGTTATTCAGAATTAATATGGTCCTGTAAAACCGAAATTACGCgg                                                                                          >  2:439805/1‑143 (MQ=255)                                                      atgaCCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGgt                                                                                         <  2:382578/140‑1 (MQ=255)                                                      atatcttGACAACCGAGATGGATCAGTACAGCAGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGgt                                                                                         <  2:104420/137‑1 (MQ=255)                                                          cccgAAAACCGAGATGGGTGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGCGACGAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATCCGTGCCGGTAATGCTGAAATTACGCGGTGTGc                                                                                     <  2:432367/140‑1 (MQ=255)                                                           cTGAAAACCGAGATGGATGGGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGcc                                                                                    <  2:120454/143‑1 (MQ=255)                                                           cTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGcc                                                                                    >  1:617414/1‑143 (MQ=255)                                                           cTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTAATCAGAATTGATACGTGCCGGTAATGGTGAAATTAAGCGGAGCGcc                                                                                    >  2:778868/1‑143 (MQ=255)                                                                aaCCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGGCGTGGGGGAGACTAAGGCAGCCAGATGGCTGGCTTTTTTACAGGTGTTATTCAGAATTGGTACGTGCCGGTAAGGCGGAAATTACGCGGTGTGCCGTAGa                                                                               >  1:404180/1‑143 (MQ=255)                                                                aaCCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACACGTGTGATTAAGAATTGATACGTGCCGGTAATGCTGACATTACGCGGTGTGCCggtga                                                                               >  1:470120/1‑139 (MQ=255)                                                                                   aTCCGTAACCACTTATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGtt                                                            <  2:771017/143‑1 (MQ=255)                                                                                    tCCGTAACCACTAATCCGGAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTg                                                           <  1:122455/143‑1 (MQ=255)                                                                                    gtggTAACCGCGAATGGGTAAGACGGTGGGGAGGCTGCGGCGGCCAGATGGCTGCCTTTTGTGCAGGTGTTATTCGGCATCGATCCGTGCGGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTg                                                           <  2:291722/140‑1 (MQ=255)                                                                                      cGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACggtggt                                                         >  1:33891/1‑143 (MQ=255)                                                                                           ccACTAATCCGTAAGACGTTGGGGAGACGAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGt                                                    <  1:543084/143‑1 (MQ=255)                                                                                            cACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTGGGTATCGTa                                                   >  2:38042/1‑143 (MQ=255)                                                                                             aCTAATCCGTAAGACGTTGGGGAGACTAAGTCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTTTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAg                                                  <  1:327476/143‑1 (MQ=255)                                                                                             aCTAATCCGTAAGACGGTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAg                                                  <  1:631834/143‑1 (MQ=255)                                                                                                       aaGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGa                                        >  1:574699/1‑143 (MQ=255)                                                                                                          aCGTTGGGGAGACTCAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTCATGCTGAAATTACGCGGTGTGCCGTAGCCGATAGAACCTTCCACGTTGGTATCGTCGGTTTTGTCGAACa                                     >  1:369164/1‑143 (MQ=255)                                                                                                          aCGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACa                                     <  2:731553/143‑1 (MQ=255)                                                                                                             ttGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGt                                  >  1:800348/1‑143 (MQ=255)                                                                                                                gggAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGGGTTATTCAGATTTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGGAGGTTTTGTCGAACAGGTTAt                               >  1:426037/1‑143 (MQ=255)                                                                                                                   agaCTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGa                            <  1:40714/143‑1 (MQ=255)                                                                                                                          ggCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTCCCGTAGACGACAGAACCTTCCACGTTTGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTccc                     <  1:725553/143‑1 (MQ=255)                                                                                                                           gCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTAGTGACGTTcccc                    >  1:613116/1‑143 (MQ=255)                                                                                                                                     ggCTGCCCTTTTTAGCGGTGTTATTCAGAATGGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACgaga          <  2:120622/143‑1 (MQ=255)                                                                                                                                          ccTTTTTTACAGGTTTTATTCAGATTTGTTTCGTGTCGGTAATGCTGATATTACGGGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTATGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGttt     <  2:231070/143‑1 (MQ=255)                                                                                                                                             tttttACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGGAGTTTTTc  >  2:341560/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                              GGGCGTAGTGGTTGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAATCCGTAAGACGTTGGGGAGACTAAGGCAGCCAGATGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTTTGTCGAACAGGTTATTGACGTTCCCCTGTAACGAGAAGTTTTTC  >  NC_000913/1159206‑1159488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.