| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 258675 | NA (NA) | 18 (0.430) | 17/282 | 1.7 | 37.5% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 384098 = | 30 (0.720) | coding (519/558 nt) | yaiS | putative PIG‑L family deacetylase | |||||
TTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCATTGAAGCTTGATAAACAGCAAGATGATCCTGATGGCGG > NC_000913/383956‑384239 | ttttATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACtgtg > 1:47376/1‑143 (MQ=255) aTTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTC < 1:412680‑M1/143‑1 (MQ=255) gcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATATTcttgtt > 2:629580‑M2/130‑143 (MQ=255) caaGGCTTCACCCCGATCGCGATCAACCTGTTGTCCGCGAAATTGTGTAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTGTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTcttctt < 2:437624/142‑1 (MQ=255) aaaGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCATCAAGTTTGACTGTGAAATTTTactctt > 2:743882‑M1/1‑137 (MQ=255) aaaGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTcttctt > 1:147862/1‑143 (MQ=255) tCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactcc > 1:37763‑M1/1‑131 (MQ=255) cccAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTc < 2:239497/143‑1 (MQ=255) ccAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGCCTGTGAAATATTCTTCTTTCACGGCTTCa > 1:442075/1‑143 (MQ=255) aGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACCCAGGCGATCATGACGCATATAATCACATCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAATTTAACTGTAAAATATTCgataataactccaactta > 1:465378‑M1/1‑125 (MQ=255) cccGCTATTCACCTGTTGTCCGCGAAATTGTCCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCaaaaa < 2:595998/141‑1 (MQ=255) gCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTGTTTAACGGAATCAAAAAcgt > 1:99494/1‑141 (MQ=255) cTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTg > 2:119126/1‑143 (MQ=255) cTATGGACCTGGTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCGAGCTGTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgata < 1:445031‑M1/143‑25 (MQ=255) tATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTCGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAACTATTCgcttatgactccaacttactgatag > 2:616094‑M1/1‑118 (MQ=255) tATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGa < 2:442675/143‑1 (MQ=255) tATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGa < 2:158200/143‑1 (MQ=255) atgggccTGTTGTCCGCGAAATTGTGAAATGGCACGCAGGCGATCATGACGCAGATACTCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATCCAAAAACCTGAg < 2:342822/138‑1 (MQ=255) ccTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgtttt < 1:719756‑M1/143‑32 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATATTCTTCGTTAACGCACTAAAATACCTGAGGCATAAAt < 2:544180‑M2/43‑1 (MQ=255) ttgtCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTATGGCACCAAGTTGGGCTGTGAAATATTTTTCTTTAAGGGATTAAAAAACCTGGGGGAaaaagg > 1:485584/1‑141 (MQ=255) tCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCTAGTTTGACTGTGAAATATTCggtaatgactccaacttcttgattgtgttttatgttca > 2:392635‑M1/1‑105 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaagcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAACCCTGAGGCATAAATGAAAg > 2:573588‑M2/96‑143 (MQ=255) ccGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGagag > 1:1821/1‑143 (MQ=255) cgcgAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTATTGCAGCTAGTTTGACTGTGAAATATTTTTCTTTTACTGTTCTAAACTCTTTAGCCATCAATGAAAGc > 2:671269/1‑143 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactacatcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGcc > 1:542244‑M2/94‑143 (MQ=255) gcgAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCATCAAGTTTGACTGTGAAATATTCggtaatgactccaactttttgatagtgttttatgttcagat > 2:646470‑M1/1‑102 (MQ=255) gcgAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagat > 1:487194‑M1/1‑102 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGTTACTTg > 2:592765‑M2/85‑143 (MQ=255) cAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCATTTATGTTTTTTTAATGCAGCAAGTGTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATAAGAACCGGTGACTTggg > 2:42417/1‑143 (MQ=255) gCACGCATGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTc < 2:453813/143‑1 (MQ=255) gCACGCAGGCGATCATGACGCATATAAGCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTc < 1:447306/143‑1 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCACAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTc > 1:324224‑M2/78‑143 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTc > 1:16700‑M2/78‑143 (MQ=255) cACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg < 2:61937‑M1/143‑59 (MQ=255) gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCga < 2:89872‑M2/74‑1 (MQ=255) gCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCga > 1:389526/1‑143 (MQ=255) cGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAATTATTTTTCTTTAATGTATTCAAAAACTTGAGTCATAAATTAAATCCAGTTATTTGTGGTTTCTTattagat > 2:325026/1‑137 (MQ=255) gATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCgaga < 1:614350/143‑1 (MQ=255) acagaagccactggagcacttcaaacacaccatcatacactaaatcagtaagttgtcagcatcaccGAAATATTCTTCTTAAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGaa < 1:681083‑M2/77‑1 (MQ=255) tCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGaag > 1:76834/1‑142 (MQ=255) ataacgcATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca < 1:710013‑M1/140‑72 (MQ=255) aTGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAAttt > 1:221144/1‑143 (MQ=255) gccacgggagcacctcaaaaacaccatcatacactaaatcaggaagttggcagcatcaccGAAATATTCTTCTGTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCg < 2:352497‑M2/83‑1 (MQ=255) aaTCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgag > 1:616004‑M1/1‑61 (MQ=255) tCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCAGAAAAATTGCGGAATCGttgg > 1:470980/1‑141 (MQ=255) acctcaaaaacaccatcatacactaaatgagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCgg < 2:347483‑M2/94‑1 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTGCGTAGCCGAGAATATGCGGAATAGTTCggca > 2:635569‑M2/48‑143 (MQ=255) caaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCggcagg > 1:624791‑M2/46‑143 (MQ=255) cgtTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag < 1:612923‑M1/143‑91 (MQ=255) cccagctTTTATGGTCTTTTAATGCAGCAAGCTTGACCGTGAAATATGCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac < 1:201535‑M1/140‑95 (MQ=255) ccTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttcttgatagtgttttatgttcacataatgccccatgactttgtcatgcagctccaccgattttgagaacgacagcgac < 1:392822‑M1/143‑95 (MQ=255) ccTAGCATTGATGTTTTTTTAAGGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATGCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAAcc < 1:209446/143‑1 (MQ=255) tAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCAt > 1:90667/1‑143 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCATTg > 1:266999‑M2/37‑143 (MQ=255) tttATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgctttttagaacgacagcgccttccgtc > 2:697683‑M1/1‑42 (MQ=255) tttATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc > 2:698536‑M1/1‑42 (MQ=255) tttttttAATGCAGCAAGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc > 1:713158‑M1/1‑36 (MQ=255) tttAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCAGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTGGCGGAATAGTTCGGCAGGCAACCAGTGAAGCTCGATAAAc > 2:51989/1‑143 (MQ=255) aaTGCAGCAAGTCTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccag < 1:591948‑M1/143‑115 (MQ=255) aaTGAAGCATGTTTGACTGTGAAATATTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccag < 2:182425‑M1/143‑115 (MQ=255) gtaagttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCATTGAAGCTTGATCAACAGCa > 2:280210‑M2/20‑143 (MQ=255) agcaAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGAAGGCAGAGATTGAAGCTTGTTGACCGGCAAgat > 2:736832/1‑143 (MQ=255) ttggcagcatcaccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGGACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCATTGAAGCTTGATAAACAGCAAgatg > 1:14769‑M2/15‑143 (MQ=255) gcaAGTTTGACTGTGAAATATTCTTCTTTCACGGATTCAAAAACCCGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCATTGAAGCTTGATAAACAGCAAgatg < 1:316440/143‑1 (MQ=255) gTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCATTGAAGCTTGATAAACAGCAAGATGATcc < 1:119126/143‑1 (MQ=255) aCTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCATTGAAGCTTGATAAACAGCAAGATGATccacatt > 2:431847/1‑138 (MQ=255) caccGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCGGGACTTCGTCCTCTCTATAGAAACAGCAAGATGATCCTGATgg < 2:624791‑M2/139‑1 (MQ=255) cGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTAGGCAGGCAACCATTGAAGCTTGATAAACAGCAAGAGGAGCCTGATGGCgg > 2:181963‑M2/2‑143 (MQ=255) | TTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACCTGTTGTCCGCGAAATTGTGCAACTGCACGCAGGCGATCATGACGCATATAATCGCGTCGTTCCTAGCTTTTATGTTTTTTTAATGCAGCAAGTTTGACTGTGAAATATTCTTCTTTAACGGATTCAAAAACCTGAGGCATAAATGAAAGCCAGGTACTTGGGGTTTCGTAGCCGAGAATTTGCGGAATAGTTCGGCAGGCAACCATTGAAGCTTGATAAACAGCAAGATGATCCTGATGGCGG > NC_000913/383956‑384239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |