| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.020) | 43 (1.070) | 37/282 | 0.1 | 97.7% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG > NC_000913/4001509‑4001791 | gtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct < 1:218611‑M2/2‑1 (MQ=255) cgttgatcgtgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 2:721281‑M2/7‑1 (MQ=255) tgatcttgtcgaaccggacgaccacgagcgactgcgcgcacaatctgaacttggccagagcctggcaacccgcccagaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttc < 1:466958‑M2/10‑1 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttc > 1:89130‑M2/131‑143 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttc < 1:309309‑M2/13‑1 (MQ=255) tggcgaccctgacgacgacgaccgactgcgcgtacaatctgaacttggccaaagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCttt < 1:471828‑M2/16‑1 (MQ=255) accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggcactggaagacatcgaagcatcggcacgcttctttgaagacgacgccggcctgcatCTCCTTCTGCAGCTTTGAAgag > 1:703409‑M2/122‑142 (MQ=255) ggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCg < 1:231530‑M2/25‑1 (MQ=255) ggacgacaaccggcgacggggccgacaatctgaacttgggcagggcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCg < 2:315312‑M2/25‑1 (MQ=255) gacgacgacgagcgactgcgcgtgcaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg < 1:564294‑M2/26‑1 (MQ=255) gagcgactgcgcgtacaatctgaacttggccagagcctgtcaaccagcgtcggcgggaaatacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACg < 1:165923‑M2/35‑1 (MQ=255) gagcgaccgggcggagaatcggaacttggccagggcagggcaacccgccaggaaaaagaagtcgtcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACg < 1:166059‑M2/35‑1 (MQ=255) cgaCAATCCGCCCTTGGCCAGAGCCTGGCCACCTGACCGTGACTGGAAGACCGCGAACGATCGGCACCTTTCGTTGAAGACGACGTCTGCCTTCAT‑‑‑‑‑CTCCTGCTACTTCTTTGAAGATGCGGAAGATTACGCCGGTAACTCCa < 2:237201/141‑1 (MQ=255) gtacaatctgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCa < 2:487074‑M2/47‑1 (MQ=255) tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc < 2:399466‑M2/48‑1 (MQ=255) atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCACTCTACtgtg > 1:394584‑M2/92‑143 (MQ=255) atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCCCtgtg > 1:10617‑M2/92‑143 (MQ=255) tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTgg > 1:58039‑M2/91‑143 (MQ=255) aacttggccagagcccggcaacccgcccggaactgcaagacatcgaagcatcgccacgtttctttgaagacgaccacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAtt < 1:147510‑M2/57‑1 (MQ=255) acgtggccagagccgggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacggcggcctgcagCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGGGGCAttt < 1:704149‑M2/58‑1 (MQ=255) ttggcaggagcctggcatcccgcgcggaactggaagccagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAGGCCGGTAACTCCACTGTGGCATTTAc < 2:640612‑M2/60‑1 (MQ=255) ggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCATCCGTGAGTAGTCGGAAGAACACGCCGGTACCTCCACTGTGGCATTCACCa > 2:673857‑M2/82‑143 (MQ=255) tcctggcgacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctacatCTCTTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 2:677031‑M2/69‑1 (MQ=255) tggcaaccggcccggacccggaagacatcgaagcatcggcacgtctctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGGAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATgg < 1:297165‑M2/72‑1 (MQ=255) aacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcgt > 1:407345‑M2/68‑143 (MQ=255) acccgcccggaactgaaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcgtc < 2:211878‑M2/77‑1 (MQ=255) cccgcgcggaacgggaagacatcgaagcatcggcacgtttctttgaagactacgacggcctgcatCGCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt < 2:674970‑M2/78‑1 (MQ=255) gcccggaactggaggacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 2:624980‑M2/81‑1 (MQ=255) gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGCAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 1:381066‑M2/81‑1 (MQ=255) ggaaccggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcacCTCCTTCTTCTTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct < 2:424653‑M2/85‑1 (MQ=255) tggaagacatcgaagcagcggcacgtgtcttggaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGACGCGGAAGATCACGCCGGTAACGCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg < 1:150601‑M2/90‑1 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTATTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTGTGTTTACTCTgcgtg > 1:134470‑M2/52‑143 (MQ=255) gacatcgtagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAGGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc < 2:132857‑M2/95‑1 (MQ=255) gacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTCGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc < 1:69816‑M2/95‑1 (MQ=255) gacatcgaagcatcggcacctttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc < 2:371614‑M2/95‑1 (MQ=255) catcgaagcatcggcacgtttctttgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgt < 1:196592‑M2/97‑1 (MQ=255) tcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtga > 1:24301‑M2/45‑143 (MQ=255) ggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGGGCGTGAACTTCCCGCt > 1:48796‑M2/35‑143 (MQ=255) acgtctctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCTGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtttt < 1:479127‑M2/112‑1 (MQ=255) ttctttgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc < 2:95765‑M2/116‑1 (MQ=255) tctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 1:287478‑M2/117‑1 (MQ=255) gacgacggcctgcatCTCCCTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc < 1:579408‑M2/128‑1 (MQ=255) ctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGGGCGTGAACTGCCCGCTTTTCGCCTGTATCGTCTGCGTGTCCGTa > 1:531646‑M2/7‑143 (MQ=255) tCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAg > 1:427215‑M2/2‑143 (MQ=255) | GATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG > NC_000913/4001509‑4001791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |