New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4115653 | 38 (0.940) | 3 (0.080) | 3/266 | 5.9 | 7.7% | intergenic (‑74/+61) | glpX/glpK | fructose 1,6‑bisphosphatase II/glycerol kinase |
? | NC_000913 | = 4115657 | NA (NA) | intergenic (‑78/+57) | glpX/glpK | fructose 1,6‑bisphosphatase II/glycerol kinase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTGGTTTCGA > NC_000913/4115516‑4115799 | tGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGCTGGCAAGTTCTCGTCTCATAGCCAACTCTAACCAGCAAGGAATGGCGCGAAGTGTAGCACAGCGGAAGGGCGGCGTTATTGATGTGTGCGGGGTTGcc > 1:616701/1‑143 (MQ=255) tAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGcccc < 2:579046/143‑1 (MQ=255) gccagccaGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAACACACTCTCAGCAGTAAGGAATGACGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCg > 1:362650/1‑143 (MQ=255) gccagccaGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTCCTCGTCTCATAGCAAACTCTCAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGCGGCCGCGAGGGATTATTGAGGTGTGCGGGGTTGCCCCCg > 2:705973/1‑143 (MQ=255) ccagccagCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTGCTCGTCGCATAGCAGCCTCTAAGCAGGAAGGAATGGCGCGAAGGGTGGCACAGGGGACGGGGGGCATTACCGACGGGTGCGGGGTCGCCCCCGc > 2:247200/1‑143 (MQ=255) cgccgcTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCg < 2:553691/143‑1 (MQ=255) ccggTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCggg < 2:129426/143‑1 (MQ=255) cTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACt > 1:684750/1‑143 (MQ=255) tGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTACCCCCGCAAGTTTCGGGACTa > 2:41213/1‑143 (MQ=255) tCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCAGCACGTTTCGGGCCTACCgg > 2:646905/1‑143 (MQ=255) gACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTCGCACCAGATAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCg < 1:460033/143‑1 (MQ=255) gACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCg < 1:686574/143‑1 (MQ=255) gACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGCTGCACCCGCACGTTGCGGGACTACCGGATGCg > 2:631852/1‑143 (MQ=255) gcgGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCa > 2:569342/1‑143 (MQ=255) cgGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACAGGATGCGGcgt > 1:427414/1‑141 (MQ=255) ttCGGTGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCAGAAACGcgt > 1:205209/1‑141 (MQ=255) atacAATTTCTCGTCTCATAGCAACCTCTAATCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTc < 1:645931/140‑1 (MQ=255) cAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCCGATGCGGCATAAACGCTTCATTCGGc > 1:680519/1‑143 (MQ=255) aGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCAGCACGTTTCGGGACGACCGGATGCGCCGTAAACCCTTCATTCGGGAt > 2:30575/1‑143 (MQ=255) tcGTGTCAGAGCAAACGCGAAGCAGGAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATGATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACa < 1:326049/143‑1 (MQ=255) tAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGACGTGTGCGGGGTTGCCCCCGCACGTTTCGGGAGTACCGGATGCGGCGTAAACGCTTCACTCGGCATTTGCATGACtcgt > 2:192295/1‑143 (MQ=255) aaaCTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGACGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATACACGCTTCCTTCGGCATCTACCCTATTCGTCgtg > 2:571747/1‑143 (MQ=255) cggaGCGGTAAGGAACGGCGGGAAGTGGAGCGCAGGGGCGTGTGGGTGTTATTGGTGTGTGCGGGGTCGCCCCCGCGCGTTTCTGGACTACCGGATGCGGCATATACGCTTCATTCGGCATTTACATTATTCGTCGTGttctt < 2:611188/140‑1 (MQ=255) aGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCAt > 2:596220/1‑143 (MQ=255) gcgAAGTGTAGCACAGGGGCAGGGAGGGCTTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCACTTGCATTATTCGTCGTTTTCTTCCCACGCCATCGCGCGttt < 1:202800/143‑1 (MQ=255) gAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTaa < 1:636061/143‑1 (MQ=255) tgtAGCACAGGGGAAGGGAGGGATTATTGAGGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGc < 2:68359/143‑1 (MQ=255) acaGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCCTTCGGCATTTACATCATTCGTCGTGTTCTCCCCACGCCATCGCGCGGCTCACCGCtttttt > 2:554085/1‑143 (MQ=255) acaGGGGAAGGGAGGGATTATTGATGTGTGCGGGATCGCTTCCGCTCGTTTCGGGACTACCGGATGCGGGATGAACGCGGTAATCTTTATTTACTTTATTCGTCTGGTTCGTCCCACGCCATCGCGCGTTGAACCACtttttt > 2:185438/1‑143 (MQ=255) ggggGAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACTCCATCGCGCGTTTAACCGCTTTTTTCCa < 1:282925/143‑1 (MQ=255) ggggAAGGGAGGGATTATGGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCa < 1:546230/143‑1 (MQ=255) ggAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATACCCGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTCTAACCGCTTTTTTCCAGc > 2:291196/1‑143 (MQ=255) tattGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTa > 2:664233/1‑143 (MQ=255) cttgttgTGTGCGGGGTTGTCGCGGCGTGTTTCCACACTCCAGGATGCCGGATGATCGCTTCATTCGGCATTTACATTATTCGTCGGGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTaa < 2:549100/142‑1 (MQ=255) gATGGGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTa < 1:37197/143‑1 (MQ=255) ggggTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTg < 1:41213/143‑1 (MQ=255) gTTTCCCCCTCACGTTTCTGGACTCCCGGTCGCGGCATAAACGCTCCATTCGGCACTTACATTATTCGTCGTGTTCGTCCCACGCCCTCGCGCGTTTAACCGCATTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTGGtt < 1:681814/143‑1 (MQ=255) tGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTGGTTTc < 2:418056/143‑1 (MQ=255) cccccGCACGTTTCGGGACTACCGGATGCGGCACACACGCGCCACTCGTCAGCGACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTGGTTTCGa > 1:138931/1‑143 (MQ=255) | TGTAGCCAGCCAGCGCCGCTGATTCGGTGACGCGGGAAAATTCGATGGCAAGTTCTCGTCTCATAGCAAACTCTAAGCAGTAAGGAATGGCGCGAAGTGTAGCACAGGGGAAGGGAGGGATTATTGATGTGTGCGGGGTTGCCCCCGCACGTTTCGGGACTACCGGATGCGGCATAAACGCTTCATTCGGCATTTACATTATTCGTCGTGTTCTTCCCACGCCATCGCGCGTTTAACCGCTTTTTTCCAGCCTGCGTAACGGTAATTACGCTCAGTGGTTTCGA > NC_000913/4115516‑4115799 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |