New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4315807	41 (0.740)	5 (0.090)	5/270	7.4	11.2%	coding (276/558 nt)	phnN	ribose 1,5‑bisphosphokinase
	?	NC_000913	= 4315817	40 (0.750)					coding (266/558 nt)	phnN	ribose 1,5‑bisphosphokinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCACTGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGATATGGTTTTCACTTC  >  NC_000913/4315667‑4315949                                                                                                                                             |                                                                                                                                               tCACTGGCGTTTTCACGGCCCCGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGACACCTGTAAACAGACGGGTTTCTTTTCCGGTTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTc                                                                                                                                              <  1:908003/143‑1 (MQ=255) tCACTGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGCGGATCTCCGGCGAAACCTGTAAACAGACAGGCAGCAGCGCCGACTCATAGCGCGCCCGCGCCTGCCGCAGATGGGCGCGAGAGCCGTTGCCGAGCACggc                                                                                                                                              >  2:215943/1‑141 (MQ=255) tCACTGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTc                                                                                                                                              <  1:962878/143‑1 (MQ=255)     tGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAAt                                                                                                                                          >  2:856252/1‑143 (MQ=255)       gCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACAGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCCGATGGGCGCGTGAGCCCCTGACCAGCACGTCGCATcc                                                                                                                                        >  2:823664/1‑143 (MQ=255)           tttCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGACCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCg                                                                                                                                    <  1:457594/143‑1 (MQ=255)              cgcGGCCACCGTGTTACAGGCGGGGGCGGAGGATCTCCGGCGAACCCGGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGCCGGATTCGACGTGc                                                                                                                                 <  1:225557/141‑1 (MQ=255)                   ccACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCa                                                                                                                            >  1:346688/1‑143 (MQ=255)                    cACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCag                                                                                                                           >  1:795115/1‑143 (MQ=255)                     aCGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCcga                                                                                                                          >  2:143033/1‑143 (MQ=255)                     aCGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCaga                                                                                                                          <  1:1013771/143‑1 (MQ=255)                     aCGGTGTTCCAGGCGCTGGCGGGGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCaga                                                                                                                          <  2:722003/143‑1 (MQ=255)                        gTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATGGATAGCGCGCCCGCGCCTCCGGCAGATGGGCGCGTGAGCCGGTGCCCAGCACGTCGAATCCGGCGGGCGGCCAGAGAt                                                                                                                       >  1:976370/1‑143 (MQ=255)                            tCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAAt                                                                                                                   <  2:346688/143‑1 (MQ=255)                                    cgggCGGAGGATCGCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTcgacgc                                                                                                           <  1:991029/141‑1 (MQ=255)                                       gCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGAGTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATGAATCTcgacgccga                                                                                                        >  1:804237/1‑143 (MQ=255)                                          gttgaTCTCCGGTGACTCCTGTACACAGCTGGGCCGAAGCGTCGATTGTTGGCGCGCTCGTGCATGTGCCGAATGGGCGCGTGAGCCGTTGACCCGCATGTCGATTCCAGCTCGCTATCAGAGATCAATCTcgacgccgacgc                                                                                                     <  2:770133/140‑1 (MQ=255)                                               tctcCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACGAGCACGTCGAATCCGGCGTGCGGCCAGAGATCAATCCCGACGCCGACGCCagaa                                                                                                >  2:752228/1‑143 (MQ=255)                                                   gggCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACa                                                                                            <  1:565991/142‑1 (MQ=255)                                                   cGGCGAAACCTGTAAGCAGCCGGGCAGCGGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCTGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACa                                                                                            <  2:258797/143‑1 (MQ=255)                                                   cGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACa                                                                                            >  2:619344/1‑143 (MQ=255)                                                      cGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGAGCAATCTCGACGCCGACGCCGTAATACAGAc                                                                                         >  2:805019/1‑143 (MQ=255)                                                             tGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATACTCCAGACCGTTAGc                                                                                  >  2:897891/1‑143 (MQ=255)                                                              gTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGCACGTTAGCg                                                                                 >  2:588651/1‑143 (MQ=255)                                                                 aaCAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGc                                                                              <  1:365878/143‑1 (MQ=255)                                                                  aCAGGCGGGCAGCGGGGCCGATTGACAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAGTCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGcc                                                                             <  2:127064/143‑1 (MQ=255)                                                                               agcGCCGATTGATAGCGGCGCCGCGCGGGCGGCAGAGGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCaa                                                                <  2:591577/143‑1 (MQ=255)                                                                                gcgcCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAAc                                                               >  1:141456/1‑143 (MQ=255)                                                                                            aGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACAAGCACGTAGAGTCCGGCGTGGAGCGTGAGAGCAAACGCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGcccc                                                   >  1:743098/1‑143 (MQ=255)                                                                                                        ccTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCATAAAGCCAACAGATATTACCCCGCGAGGGTaaaa                                       >  2:184828/1‑143 (MQ=255)                                                                                                        ccTGCGGCAGATGGGCGCGGGAGCCGTTGACCAGCACGTCGAACCCGGCGATCAGCCGGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTaaaa                                       <  1:326671/143‑1 (MQ=255)                                                                                                             ggCAGGGGGGCGCGAGAGCCGTCGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTc                                  <  2:97428/143‑1 (MQ=255)                                                                                                               taggtcggCGCGTGGGCCGGTGACCAGCACGTCGAAGCCGGGGTGCAGCCAGAGATCGATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCt                                <  2:370887/137‑1 (MQ=255)                                                                                                                 ggtGGGGGCGTGAGCCGTTGGCCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTgc                              <  2:36309/141‑1 (MQ=255)                                                                                                                         cgTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCGACAGATTTGGCCCCGCGCGGGTAAAAAACTCCTgctcgctccg                      >  1:479604/1‑141 (MQ=255)                                                                                                                           tGAGCCGGTGAGCAGCGCGTGGAAGCGGGCGTGCAGCCAGAGATCAGTGTCGACGCCGACGCCATAATACAGACCGTGAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAggg                    <  2:751508/143‑1 (MQ=255)                                                                                                                               ccGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGat                >  1:248609/1‑143 (MQ=255)                                                                                                                               ccGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGAGTAAAAAACTCCTGCCCGCTCAGGGCGat                >  2:577888/1‑143 (MQ=255)                                                                                                                                     aCCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTCAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAACCTCCTGCTCGCGCAGGGCGATATgggt          >  2:740561/1‑141 (MQ=255)                                                                                                                                       cAGCACGCCGAATCCGGCGTGCAGCCAGAGACCAATCTCGACGCCGACGCCATAATACAGACCGCTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCTCTCAGGGCGATATGGtttt        <  1:54146/143‑1 (MQ=255)                                                                                                                                           aCGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGATATGGTTTTCACt    >  1:920510/1‑143 (MQ=255)                                                                                                                                             gTCGAATGCGGCGTGCAGCGAGAGATCAAGCTCGACGCCGACGCCAGAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGATATGGTTTTCACTTc  <  2:788656/143‑1 (MQ=255)                                                                                                                                             gTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATGATACAGTCCGTTAGCGGGCCAGCTTGAGGCCACCAGATTTTGCCCCGCGCGGGTACAAAACTCCTGCTCGCTCAGCGCGGTATGGTTTTCACTTc  >  1:295252/1‑143 (MQ=255)                                                                                                                                             |                                                                                                                                               TCACTGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGATATGGTTTTCACTTC  >  NC_000913/4315667‑4315949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.