mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4498394 | 11 (0.200) | 4 (0.080) | 3/490 | 5.4 | 27.5% | noncoding (214/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 4498760 | NA (NA) | noncoding (580/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 3186309 | 1 (0.020) | 4 (0.080) | 3/490 | 5.4 | 80.7% | noncoding (214/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 3186675 | NA (NA) | noncoding (580/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 3034343 = | 46 (0.850) | 4 (0.080) | 3/490 | 5.4 | 7.3% | coding (832/1518 nt) | lysS | lysine tRNA synthetase, constitutive |
| ? | NC_000913 | 3034586 = | 58 (1.120) | coding (589/1518 nt) | lysS | lysine tRNA synthetase, constitutive | |||||
| * | ? | NC_000913 | 2997112 = | NA (NA) | 4 (0.080) | 3/490 | 5.4 | 29.5% | noncoding (580/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 2997478 = | 10 (0.190) | noncoding (214/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 2069692 = | NA (NA) | 4 (0.080) | 3/490 | 5.4 | 58.2% | noncoding (580/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 2070058 = | 3 (0.060) | noncoding (214/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 1468661 = | NA (NA) | 4 (0.080) | 3/490 | 5.4 | 41.1% | noncoding (580/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 1469027 = | 6 (0.110) | noncoding (214/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 381473 | 2 (0.040) | 4 (0.080) | 3/490 | 5.4 | 67.6% | noncoding (214/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 381839 | NA (NA) | noncoding (580/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 1153312 = | 77 (1.430) | 3 (0.060) | 3/498 | 5.5 | 4.4% | coding (13/810 nt) | pabC | 4‑amino‑4‑deoxychorismate lyase component of para‑aminobenzoate synthase multienzyme complex |
| ? | NC_000913 | 1153646 = | 57 (1.090) | coding (347/810 nt) | pabC | 4‑amino‑4‑deoxychorismate lyase component of para‑aminobenzoate synthase multienzyme complex | |||||
| * | ? | NC_000913 | 647423 = | 64 (1.190) | 3 (0.060) | 3/498 | 5.5 | 4.8% | coding (87/879 nt) | citG | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
| ? | NC_000913 | 647850 = | 58 (1.100) | coding (186/552 nt) | citX | apo‑citrate lyase phosphoribosyl‑dephospho‑CoA transferase | |||||