New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3144480	60 (1.200)	3 (0.060)	3/464	NT	5.6%	coding (661/987 nt)	hybA	hydrogenase 2 4Fe‑4S ferredoxin‑type component
	?	NC_000913	= 3144983	45 (0.950)					coding (158/987 nt)	hybA	hydrogenase 2 4Fe‑4S ferredoxin‑type component

CTTTTTTCAGTGCAGAGACCGGGCACACAGAGACACAGTTCGGATCGACGCAGTGCATACACTGTTTCTTAATGTACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACG  >  NC_000913/3144747‑3145269                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                               cTTTTTTCAGTGCAGAGACCGGGCACACAGAGACACAGTTCGGATCGACGCAGTGCATACACTGTTTCTTAATGTACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATcc                                                                                                                                                                                                                                            <  1:3265/289‑1 (MQ=255)            gCAGAGACCGGGCACACAGAGACACAGTTCGGATCGACGCAGTGCATACACTGTTTCTTAATGTACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGTCAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGAAAGCCTGGCAGACTACGCACAAGGCAGAGTCGTACAACATCCCCAGCTATCCCGGAATTggcg                                                                                                                                                                                                                                 >  2:330351/1‑289 (MQ=255)                                                   cAGTGCATACACTGTTTCTTAATGTACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAgcg                                                                                                                                                                                          <  2:220035/289‑1 (MQ=255)                                                                gTTTCTTAATGTACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCaa                                                                                                                                                                             >  1:82877/1‑289 (MQ=255)                                                                gTTTCTTAATGTACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCaa                                                                                                                                                                             >  1:367887/1‑289 (MQ=255)                                                                  ttCTTAATGTACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAAt                                                                                                                                                                            >  1:446989/1‑288 (MQ=255)                                                                           tACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTTGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAACGATCCCGGAATTGGCGGGCGGTGTTCAGCAGCCGCATGACTGACAGACGGCAGCGGCCCCGTCAGCACTGCCCCCCagg                                                                                                                                                                  >  2:406133/1‑289 (MQ=255)                                                                           tACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACACCCCCAGCGATCCCGGAATTggcggg                                                                                                                                                                                                                               <  2:341333/228‑1 (MQ=255)                                                                           tACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACACCCCCAGCGATCCCGGAATTggcggg                                                                                                                                                                                                                               >  1:341333/1‑228 (MQ=255)                                                                             cgcgTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCaggag                                                                                                                                                                >  1:205049/1‑289 (MQ=255)                                                                                     cGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGgctgct                                                                                                                                                          <  1:330351/287‑1 (MQ=255)                                                                                           cctcctGGTCTTTGTTGACCCCTGGGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCaagcctggcagcgaataccactatccgcgtcagacgctgaaatctggcgacacttacctgcatacggtgccgaaatattatccgcatctgtacggcgagaaagagggcggcggtactcaggttctggtactgacgggtgtgc                                                                                                                                                  >  1:102036‑M2/1‑147 (MQ=255)                                                                                            ctcctGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCaagcctggcagcgaataccactatccgcgtcagacgctgaaatctggcgacacttacctgcatacggtgccgaaatattatccgcatctgtacggcgagaaagagggcggcggtactcaggttctggtactgacgggtgtgcc                                                                                                                                                 >  1:120798‑M2/1‑146 (MQ=255)                                                                                                       tgtggACCCCGTTGCCGCTGGTCCACACCTGAATGATATTATTGGTAGACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCGTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGtt                                                                                                                                      <  2:446989/289‑1 (MQ=255)                                                                                                            aCCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAg                                                                                                                                                                                                                                                                   <  1:164659/159‑1 (MQ=255)                                                                                                            aCCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAg                                                                                                                                                                                                                                                                   >  2:164659/1‑159 (MQ=255)                                                                                                            aCCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACgg                                                                                                                                 >  1:49940/1‑289 (MQ=255)                                                                                                                    gCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCaagcctggcagcgaataccactatccgcgtcagacgctgaaatctggcgacacttacctgcatacggtgccgaaatattatccgcatctgtacggcgagaaagagggcggcggtactcaggttctggtactgacgggtgtgccttatgaaaatctcgacctgccgaa                                                                                                                         >  2:105358‑M2/1‑122 (MQ=255)                                                                                                                        cTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCg                                                                                                                     >  1:15289/1‑289 (MQ=255)                                                                                                                                     gAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTa                                                                                                        >  1:294654/1‑289 (MQ=255)                                                                                                                                           tgTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTCCGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCTCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGCCTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTCATAAAATTTCGTCGGTTCACTGTTATTCTCACCGTGATTCCACGttttttt                                                                                                    >  2:108797/1‑282 (MQ=255)                                                                                                                                             ttATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGTAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCCGCGCGCCCGTTCGCAATGTCCCGCAGGAGGCTCCTTTACTAAATTTACGTTTGTTCACGGTTCTTCCTCTCGTGAGTCAGCGTTAtttttctt                                                                                                >  2:109589/1‑289 (MQ=255)                                                                                                                                                ttGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCtttt                                                                                              >  1:486362/1‑288 (MQ=255)                                                                                                                                                   gTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTg                                                                                          >  2:94509/1‑289 (MQ=255)                                                                                                                                                      taCGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGt                                                                                                                                           >  1:383665/1‑237 (MQ=255)                                                                                                                                                      taCGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGt                                                                                                                                           <  2:383665/237‑1 (MQ=255)                                                                                                                                                        cGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTgacga                                                                                      >  1:307037/1‑288 (MQ=255)                                                                                                                                                         ggCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTgacgac                                                                                     >  2:338210/1‑288 (MQ=255)                                                                                                                                                                             cGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATc                                                                 >  2:76019/1‑288 (MQ=255)                                                                                                                                                                                   ggTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTg                                                           >  1:133991/1‑288 (MQ=255)                                                                                                                                                                                              cTTGCGGGTTACTTTCAGGGAAATTGAGATCCTGCCACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGcaacc                                               <  2:133991/289‑1 (MQ=255)                                                                                                                                                                                              cTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGcaacc                                               >  1:155610/1‑289 (MQ=255)                                                                                                                                                                                                   gggTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTggcggg                                                                                                                                                                                                                               <  1:472752/108‑1 (MQ=255)                                                                                                                                                                                                   gggTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTggcggg                                                                                                                                                                                                                               >  2:472752/1‑108 (MQ=255)                                                                                                                                                                                                        aCGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGca                                                                                                                                                                                                                                                                             <  2:482918/57‑1 (MQ=255)                                                                                                                                                                                                        aCGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGca                                                                                                                                                                                                                                                                             >  1:482918/1‑57 (MQ=255)                                                                                                                                                                                                             cAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACAccg                                <  2:82877/289‑1 (MQ=255)                                                                                                                                                                                                                   aaTTGCTATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAg                           <  1:406133/288‑1 (MQ=255)                                                                                                                                                                                                                        atatCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGAccc                                                                                   >  2:461776/1‑227 (MQ=255)                                                                                                                                                                                                                        atatCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGAccc                                                                                   <  1:461776/227‑1 (MQ=255)                                                                                                                                                                                                                           tCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAAt                  <  2:155610/289‑1 (MQ=255)                                                                                                                                                                                                                            ccTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACCCCGGCAACCAACCCAACCACCCCCCCGAGCAAACCCATa                 >  2:454557/1‑289 (MQ=255)                                                                                                                                                                                                                              tGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCACAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCCTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGACACCACACCAACCACACCCCCGAGCAACACAAttg                >  1:244552/1‑286 (MQ=255)                                                                                                                                                                                                                                acacTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAgcg              >  1:371151/1‑288 (MQ=255)                                                                                                                                                                                                                                      ggTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCa                                                                             >  2:373064/1‑219 (MQ=255)                                                                                                                                                                                                                                      ggTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCa                                                                             <  1:373064/219‑1 (MQ=255)                                                                                                                                                                                                                                      ggTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATCGCGCCTGCag       >  1:387939/1‑289 (MQ=255)                                                                                                                                                                                                                                       gTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCaga      >  1:355938/1‑289 (MQ=255)                                                                                                                                                                                                                                            gCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCCGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCAGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGGGAGTCAGAGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCCCCGCCACCACGCTGACACCGGCAACCCACCCAACCACACCGCCGACCACACCAACAGCGCCGTCAgagatg  >  2:41457/1‑286 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                               CTTTTTTCAGTGCAGAGACCGGGCACACAGAGACACAGTTCGGATCGACGCAGTGCATACACTGTTTCTTAATGTACGCGTAGCCGTTCTCCTCCTGGTCTTTGTTGACCCCTGTGCCGCTGGTCCACACCTGAATGATGTTATTGGTATACGGCGACAGTTTGTCGTTGTTCGACCAGGTCTGTTCCCCTTGCGGGTTACGTTCAGGGAAATTGATATCCTGACACTTGGTGACGCAAGCCTGGCAGCCTACGCACAAGGTCGAGTCGTACAACATCCCCAGCGATCCCGGAATTGGCGGGCGGTTTTCAGCAGCCGCATGACTGACAGACGGCAGCGCGCCCGTCAGCAATGCCCCGCAGGAGGCTGCTTTAATAAAATTACGTCTGTTCACGGTTATTCTCCCCGTGAGTCAGCGTTATCTTTCTTTTGCTGACGACCCAGTTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCCTGCAGAGACG  >  NC_000913/3144747‑3145269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.