New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 448507753 (1.060)4 (0.080) 3/478 NT 6.7% coding (875/1512 nt) pepA multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor
?NC_000913 = 4485154 60 (1.230)coding (798/1512 nt) pepA multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor
Rejected: Coverage evenness skew score above cutoff.

CGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCAATCGCCAGACCGTGCTGGATCGC  >  NC_000913/4484871‑4485435
                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                         
cGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAACCCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGAt                                                                                                                                                                                                                                                                                      <  1:126137/289‑1 (MQ=255)
 gCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATACCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGGCGAAGGTTAAACCTTTCACCCCCAGCCCGGtt                                                                                                                                                                                                                                                                                     >  2:347467/1‑289 (MQ=255)
                 ccTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCCCATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCCAGATAACGCCGGAGTCGCAGGTTAAACCTTTACCCCCCAGCACGGTTAGGCGTGCATCTTcc                                                                                                                                                                                                                                                                      >  2:345560/1‑288 (MQ=255)
                 ccTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACATTTACTCACCAGCACGATTGGGCGTGCATCTTCCg                                                                                                                                                                                                                                                                     >  1:181586/1‑289 (MQ=255)
                             ggtttaaGCACTTCAACGGTTTGACCGGGCATGGTGGTTAACAAATCGCCCGGACGGTAGGCGCGTCAGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCCTCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCt                                                                                                                                                                                                                                                          <  2:408871/282‑1 (MQ=255)
                                        ttCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTggg                                                                                                                                                                                                                                                                                  <  2:413561/253‑1 (MQ=255)
                                        ttCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTggg                                                                                                                                                                                                                                                                                  >  1:413561/1‑253 (MQ=255)
                                                 ttGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACAt                                                                                                                                                                                                                                      <  1:161644/288‑1 (MQ=255)
                                                  tGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTTCCTTTGTACTCAATCACCGACATCa                                                                                                                                                                                                                                    >  1:371019/1‑289 (MQ=255)
                                                  tGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACCTc                                                                                                                                                                                                                                     >  1:378640/1‑288 (MQ=255)
                                                     ccGGACATGGTGGTTAACACATCGCCCGGACGTTAGGCTCGTCCTCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGc                                                                                                                                                                                                                                  <  1:463813/288‑1 (MQ=255)
                                                          cATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCg                                                                                                                                                                                                                            >  1:449332/1‑289 (MQ=255)
                                                                  ttAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCg                                                                                                                                                                                                                     <  1:72667/288‑1 (MQ=255)
                                                                       acaTCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGACCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCCCGATTGGGCGTGCCTCTTCCGACCCGTTGCCTTTGTACTCACTCACCGTAATTAGCCATTCGTTTTGCGACCCCt                                                                                                                                                                                                               >  2:67/1‑289 (MQ=255)
                                                                           cGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTgac                                                                                                                                                                                                            >  2:291235/1‑288 (MQ=255)
                                                                                 gACGTTAGGGTCGGCCGCCGGGAGTGTGTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCGTCCGCATCACGCCGTAACCCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGAAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGaccgaccg                                                                                                                                                                                                      <  2:371019/288‑1 (MQ=255)
                                                                                  aCGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGc                                                                                                                                                                                                     <  1:407954/288‑1 (MQ=255)
                                                                                      tAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGa                                                                                                                                                                                                 <  1:264472/288‑1 (MQ=255)
                                                                                       aGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCCCCGACATTAGCGATTCGATTTGAGAACCCTGACCGACCGCCAGATAg                                                                                                                                                                                              >  2:495149/1‑289 (MQ=255)
                                                                                          cTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAgg                                                                                                                                                                                             <  2:45909/288‑1 (MQ=255)
                                                                                          cTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAgg                                                                                                                                                                                             <  1:108263/288‑1 (MQ=255)
                                                                                           tCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGt                                                                                                                                                                                                                           >  2:61737/1‑257 (MQ=255)
                                                                                           tCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGt                                                                                                                                                                                                                           <  1:61737/257‑1 (MQ=255)
                                                                                             gTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATg                                                                                                                                                                                         <  1:347467/289‑1 (MQ=255)
                                                                                                  ccAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATc                                                                                                                                                                                     >  2:367719/1‑288 (MQ=255)
                                                                                                   cAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATCTCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATccc                                                                                                                                                                                   <  2:292513/289‑1 (MQ=255)
                                                                                                          gTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGctct                                                                                                                                                                            <  2:39718/289‑1 (MQ=255)
                                                                                                                    ccTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGACTCGAAGGTTAAAACTTTACCCACTAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACCTCACAGATTCGTTTTGCGAACCCTGACCGCGCGCCCGATCGCCATTCAACCCCAGCCATTTCctctca                                                                                                                                                                   >  2:484397/1‑286 (MQ=255)
                                                                                                                       gCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCCGATAGGAATGCATCCCCAGCTCTTTCATcctctttt                                                                                                                                                               >  2:372782/1‑282 (MQ=255)
                                                                                                                                          tAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtgat                                                                                                                                            <  2:83108/289‑1 (MQ=255)
                                                                                                                                                 cAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGCTAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACAt                                                                                                                                       >  2:246214/1‑287 (MQ=255)
                                                                                                                                                           tCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTa                                                                                                                             >  1:128477/1‑287 (MQ=255)
                                                                                                                                                                                     aaCCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGaa                                                                                                 <  1:291235/289‑1 (MQ=255)
                                                                                                                                                                                     aaCCGCTGCCGCACCGCACATATCGTACGTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGaa                                                                                                 <  1:345560/289‑1 (MQ=255)
                                                                                                                                                                                               gcaccgcacATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAg                                                                                       <  1:128078/289‑1 (MQ=255)
                                                                                                                                                                                                     cacaTATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACCTTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGt                                                                                 >  2:110429/1‑289 (MQ=255)
                                                                                                                                                                                                     cacaTATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGgcg                                                                                                           <  1:457485/263‑1 (MQ=255)
                                                                                                                                                                                                     cacaTATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGgcg                                                                                                           >  2:457485/1‑263 (MQ=255)
                                                                                                                                                                                                               aCTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCCGGCGCGCTTGTGAAGCCAGGTAAGCGGCGTTACGGatat                                                                        >  2:479642/1‑288 (MQ=255)
                                                                                                                                                                                                                  tcatctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGaa                                                                                                 <  2:190180/260‑1 (MQ=255)
                                                                                                                                                                                                                  tcatctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGaa                                                                                                 >  1:190180/1‑260 (MQ=255)
                                                                                                                                                                                                                  tcatctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTcg                                                                     >  1:428893/1‑288 (MQ=255)
                                                                                                                                                                                                                   catctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCaa                                                                                                                                                                                                                                                >  2:195688/1‑116 (MQ=255)
                                                                                                                                                                                                                   catctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCaa                                                                                                                                                                                                                                                <  1:195688/116‑1 (MQ=255)
                                                                                                                                                                                                                      ctcatcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCggcggc                                                                >  1:86422/1‑289 (MQ=255)
                                                                                                                                                                                                                           ccATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGgcgcg                                                                                                         >  1:195178/1‑243 (MQ=255)
                                                                                                                                                                                                                           ccATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGgcgcg                                                                                                         <  2:195178/243‑1 (MQ=255)
                                                                                                                                                                                                                                   tCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGGTAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCgagct                                                   >  2:67407/1‑287 (MQ=255)
                                                                                                                                                                                                                                           cTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTtgc                                            <  1:110429/288‑1 (MQ=255)
                                                                                                                                                                                                                                           cTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTtg                                             <  1:484397/287‑1 (MQ=255)
                                                                                                                                                                                                                                           cTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTtg                                             <  1:479642/287‑1 (MQ=255)
                                                                                                                                                                                                                                                     aTACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATc                                  >  1:229004/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         cgccgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCcggc                             >  1:2855/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            cgGAGTCGAGGGTTAAACCTTTACCCACCAGCACGCATGGGCGTGCATCTTCCGAGGCGTGGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCggcggc                          <  2:378640/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            cgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCggcggc                          <  1:246214/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              gAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCaa                        >  1:62790/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              gAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCaa                        >  1:49604/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               aGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGCTAACGCGGGTGATGACCTTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTTAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCCGCaa                        >  2:420202/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                   gAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCAATCGcc                   >  2:4868/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       gTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCAATCGCCAGa                <  2:428893/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ttAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCAATCGCCAGa                <  1:495149/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ttAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCAATCGCCAGa                <  1:4868/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ttAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCAATCGCCAGa                <  1:367719/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    ccaccaGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCAATCGCCAGACCGTGCTGGATcgc  <  2:49604/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                         
CGCACAGTACCAGGCGGCCTTCAGCGTCGGTGTTCAGCACTTCAACGGTTTGACCGGACATGGTGGTTAACACATCGCCCGGACGATAGGCTCGTCCGCCAGGCATGTTTTCGCAGCCTGCCAACACGCCGATAACGTTAATCGGCAGTTGTAGCTCCGCGACCATCCGCATCACGCCGTAAACCGCTGCCGCACCGCACATATCGTACTTCATCTCATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGATCTTTTGCTGCTTTAATCCCGGCGGCAATCGCCAGACCGTGCTGGATCGC  >  NC_000913/4484871‑4485435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.