Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 4,001,645 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016442 (0.030)61 (0.810) 56/280 0.3 96.8% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 2 (0.030)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC  >  NC_000913/4001506‑4001783
                                                                                                                                          |                                                                                                                                           
aTGGATTGATCTTGTCGAACCGGACGACGGCGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGTAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc                                                                                                                                         <  1:1008735‑M1/143‑5 (MQ=255)
   gATTGATCTTGTGGAGCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACAGCGAAGCATCGCCTCGTTTCTGTTAAGACGACGACGGCCTGCATctccttc                                                                                                                                      <  1:1287574‑M1/143‑8 (MQ=255)
        aTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATGTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATGGAAGCATCGGCACGTTGCGTTGAAGAGGACGACGGCCTGCAGatccttcttggt                                                                                                                                 >  1:285643‑M1/1‑131 (MQ=255)
        aTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctt                                                                                                                                 <  1:859890‑M1/143‑13 (MQ=255)
         tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGGCGGCCTGCATctacttcttcttt                                                                                                                                >  1:949684‑M1/1‑130 (MQ=255)
          ctggtcgAACCGGACGACGACGAGCGACGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttct                                                                                                                               <  1:262505‑M1/140‑15 (MQ=255)
            tGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt                                                                                                                             >  1:902791‑M1/1‑127 (MQ=255)
              tCGAGCAGGCCGCCGACGGCCGACTGCGCGTACAATCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga                                                                                                                           <  2:1010207‑M1/143‑19 (MQ=255)
               cGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa                                                                                                                          <  1:1047921‑M1/143‑20 (MQ=255)
               cGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa                                                                                                                          <  1:1064605‑M1/143‑20 (MQ=255)
                gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGGCGACGGCCTGCATctccttcttcttcctttacg                                                                                                                         >  2:717158‑M1/1‑123 (MQ=255)
                    cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctactactttgcaggtgc                                                                                                                     >  1:92295‑M1/1‑119 (MQ=255)
                        cgacgacgaGCGCCTGCGCGTACAATCTGAACTTGTCTAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa                                                                                                                 <  2:845990‑M1/143‑29 (MQ=255)
                         gacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGGATctccttcttcttctttgcagatggcgaag                                                                                                                >  2:805765‑M1/1‑114 (MQ=255)
                           cgacgaGCGACTGCGCGTACACTCTCAACCTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGGGGCATCGGCACTTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagat                                                                                                              <  2:816136‑M1/143‑32 (MQ=255)
                              cgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcac                                                                                                           <  1:1150581‑M1/143‑35 (MQ=255)
                               gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGATGACGACGACGGCCTGCATctccttcttcttctttgcagaggcgggagagcacg                                                                                                          >  1:687246‑M1/1‑108 (MQ=255)
                                      tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa                                                                                                   >  1:1251336‑M1/1‑101 (MQ=255)
                                       gcgcGTACCATCTGAACTTGGCAAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCCCGTTTCTTTGAACACGACGACGCCCTGCATctccttcttcttctttgaagatgcggaagctcacgccggtaac                                                                                                  <  1:367360‑M1/143‑44 (MQ=255)
                                             aCAATCTGCACTTGGCCAGAGCCTTGCGACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact                                                                                            <  2:240176‑M1/143‑50 (MQ=255)
                                             aCAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact                                                                                            >  1:878908‑M1/1‑94 (MQ=255)
                                               aaTCTGAACTTGGCCAGAGCCCGGCAACCCGCCGGGAACTGTAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTTCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt                                                                                          <  1:87391‑M1/143‑52 (MQ=255)
                                                  cTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGGGTCTTTGAAGACGACGACGGCCTGCAGctcctccttcttctttgaagatgcggaagagcacgccggtaactccacagtggc                                                                                       >  1:162833‑M1/1‑89 (MQ=255)
                                                       cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgccattta                                                                                  >  1:132868‑M1/1‑84 (MQ=255)
                                                        ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac                                                                                 >  1:589706‑M1/1‑83 (MQ=255)
                                                            ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatc                                                                             <  2:700173‑M1/143‑65 (MQ=255)
                                                             cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttgccatcc                                                                            >  1:875365‑M1/1‑78 (MQ=255)
                                                               gagCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt                                                                          <  1:234392‑M1/143‑68 (MQ=255)
                                                                ggcCTGGCAACCCGCCCGGAAGTGGAGGACATCGAGGCATCGGCACTTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtg                                                                         <  2:1175554‑M1/142‑69 (MQ=255)
                                                                agCCGGGCACCCCGCCCGGATCTGGAAGACATCGAAGCATCGTCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtg                                                                         <  2:845082‑M1/143‑69 (MQ=255)
                                                                 gCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga                                                                        <  1:646561‑M1/143‑70 (MQ=255)
                                                                   cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGACGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg                                                                      >  1:240746‑M1/1‑72 (MQ=255)
                                                                       cAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga                                                                        <  2:876968‑M1/137‑70 (MQ=255)
                                                                       cAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga                                                                        >  1:876968‑M1/1‑68 (MQ=255)
                                                                        aaCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt                                                                 <  1:1136290‑M1/143‑77 (MQ=255)
                                                                          tccgcccggAGCGGGAAGACATCGAAGCATCGGCACCTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct                                                               <  2:186817‑M1/142‑79 (MQ=255)
                                                                          ctcgcccgGAGCGGGTGGTCATCGGGGCAGCGGCAAGTTTCTTTGAAGCCGTCGACGG‑‑TGCGCAT‑‑‑CTCAGTCTCCTCCTTTGATGATGCGGAAGCTCGCGCCGGTAACTCGACTGGGGCATTTACCATCCGTGATGGGCGTCt                                                          <  2:1291798/141‑1 (MQ=255)
                                                                              cccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttt                                                           <  1:940858‑M1/143‑83 (MQ=255)
                                                                                     cTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgctggtcgtctgtttactctgc                                                    >  1:1094749‑M1/1‑54 (MQ=255)
                                                                                         aaGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga                                                <  1:598481‑M1/143‑94 (MQ=255)
                                                                                           gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc                                              <  1:550776‑M1/143‑96 (MQ=255)
                                                                                           gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc                                              <  1:1315621‑M1/143‑96 (MQ=255)
                                                                                             cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctcctttgcagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt                                            <  1:474597‑M1/143‑98 (MQ=255)
                                                                                              aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaaatccactgtggcatttaccatccgcgatggccgtctgtttactctgcgcgagcgtg                                           >  2:532248‑M1/1‑45 (MQ=255)
                                                                                               tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcggga                                          >  1:432283‑M1/1‑44 (MQ=255)
                                                                                                cGAAGCATCGGGACGTTTCTTTGGAGCCGGCGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa                                         <  2:495505‑M1/143‑101 (MQ=255)
                                                                                                 gAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCCTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgagtgagcggggac                                        >  2:991466‑M1/1‑42 (MQ=255)
                                                                                                    gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttgttctgctttgaagatgcggaagagcacgccggtaaccccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc                                     <  1:580667‑M1/143‑105 (MQ=255)
                                                                                                     cATCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcaccccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcc                                    <  1:1044827‑M1/143‑106 (MQ=255)
                                                                                                          gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcccctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt                               >  2:425985‑M1/1‑33 (MQ=255)
                                                                                                          gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgccggttttctctgcgtgagcgtgaactgcccgctt                               >  2:950545‑M1/1‑33 (MQ=255)
                                                                                                               tttCTTTGGAGACGTCGTGGCCCTGCACctccgtctgcttcttgggaggtgcggaagatcacgccggtaactccgctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt                          <  2:1218263‑M1/143‑116 (MQ=255)
                                                                                                                 tCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct                        <  2:949684‑M1/143‑118 (MQ=255)
                                                                                                                  cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt                                                  >  2:437324‑M1/1‑25 (MQ=255)
                                                                                                                  cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt                                                  <  1:437324‑M1/116‑92 (MQ=255)
                                                                                                                   tttGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCACCTACAAAAATGCGGAAGATCACGCCGGTAACTCCACTGTAACACACACCAACCATAATCAACGTCTGTTTACTCTCCGTGACCATGAACTGCCCGCTTTTCGTCTGt                 >  2:896354/1‑143 (MQ=255)
                                                                                                                          acgacgacgGCCTGCATctccttcttcttatttgcagatacggaggatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgagctgcccacttttcgcctgtcgcgtag               >  1:258515‑M1/1‑17 (MQ=255)
                                                                                                                            gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtctgc             >  1:1354021‑M1/1‑15 (MQ=255)
                                                                                                                            gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc             <  1:280845‑M1/143‑129 (MQ=255)
                                                                                                                               gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtggactgcccgcttttcgtctgtctcgtttgcgtg          >  1:644166‑M1/1‑12 (MQ=255)
                                                                                                                                  ggCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtaagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgccc       <  2:240746‑M1/143‑135 (MQ=255)
                                                                                                                                    ccTGCATctccttcttcttctttgaagatgcggaagagcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgt     >  1:576099‑M1/1‑7 (MQ=255)
                                                                                                                                       gCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagc  >  1:186910‑M1/1‑4 (MQ=255)
                                                                                                                                          |                                                                                                                                           
ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC  >  NC_000913/4001506‑4001783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.