New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =12 (0.160)72 (1.080) 54/248 0.1 88.0% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 9 (0.140)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCA  >  NC_000913/1209477‑1209759
                                                                                                                                              |                                                                                                                                            
gcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaac                                                                                                                                              >  1:1084675‑M2/143‑143 (MQ=255)
     tgcttttgcggcattccacccccactgaatgagtactgattgctcaagaccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTa                                                                                                                                         <  1:548740‑M2/6‑1 (MQ=255)
     tgcttttgcggcattccacccccacggaatgattactgattgctcaataccaccaatcataaccggtatagctatggacccggtgcgtccgaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTa                                                                                                                                         <  1:370714‑M2/6‑1 (MQ=255)
         tttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaacccggtgcgtcctaatgtagccgttgctgcatagagttttgctccttctcctaaaccaaCGTACATGaa                                                                                                                                     >  2:604272‑M2/134‑143 (MQ=255)
         tttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcatcgagttttgctacttctccccaacccaCGTttattca                                                                                                                                     >  1:1256607‑M2/134‑140 (MQ=255)
           tgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaaa                                                                                                                                   <  1:418878‑M2/12‑1 (MQ=255)
           tgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctccattgatttttgttccttctcccaaaccaaCGTTTATGaaaa                                                                                                                                   <  1:1062945‑M2/12‑1 (MQ=255)
             ttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCGTTCTCCCAAACCAACGTTTATGCAAATg                                                                                                                                 >  1:565723/1‑143 (MQ=255)
               gcattcctcccccactgaattattactgattgctcaataccactaatcttaaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                               <  2:1047684‑M2/16‑1 (MQ=255)
               gcattccacccccactcaatgattactgattgctcaataccaccaatcataaccggtatagctatgaacccggtgcgtccttatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaa                                                                                                                               <  1:139704‑M2/16‑1 (MQ=255)
                   tccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGaaa                                                                                                                           >  2:37497‑M2/124‑143 (MQ=255)
                    ccacccctactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAAt                                                                                                                          <  1:420120‑M2/21‑1 (MQ=255)
                        ccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACa                                                                                                                      >  1:141931‑M2/119‑143 (MQ=255)
                         cccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACaa                                                                                                                     >  2:697714‑M2/118‑143 (MQ=255)
                         cccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACaa                                                                                                                     >  1:789655‑M2/118‑143 (MQ=255)
                              tgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCaaa                                                                                                                <  1:1278604‑M2/31‑1 (MQ=255)
                                aatgattactgattgctcaataccaccaatcataaccggtatagctatgcaaccggtgcgtcctaatgtagccgttgctgcattgagttctgctccttctcccaaaccaaCGTGTATGAAAATGAAGAAATAACAAGCAAATg                                                                                                              >  2:957911‑M2/111‑143 (MQ=255)
                                 atgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                                                                                             <  1:27681‑M2/34‑1 (MQ=255)
                                  tgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGc                                                                                                            <  2:1084675‑M2/35‑1 (MQ=255)
                                    attactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                                                          >  1:1169570‑M2/107‑143 (MQ=255)
                                        gaagaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAtt                                                                                                      <  2:1133360/139‑1 (MQ=255)
                                          aaaGCGGCACCATTGCGTTTCAGCAAAACTCGGACCTGAAGGGCAAAAGGCCGCGGAACCGGGACACCAACAGGAAAGCCATAGCGTTCTCCGAAACTAACGTTTATGAAAATGAATAAATAACAAGCAAATGGCAACAGTcc                                                                                                    >  2:896262/1‑143 (MQ=255)
                                           attgctcaataccaccagtcataaccggtatagctatgaaaccggtgcggcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                                                                   <  2:631840‑M2/44‑1 (MQ=255)
                                            ttgctcaataccaccaatcataaccggtatagctatgcaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTg                                                                                                  >  2:246944‑M2/99‑143 (MQ=255)
                                               ctcaataccaaagatgatacccggtataggtatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtt                                                                                               <  2:465503‑M2/48‑1 (MQ=255)
                                                tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                                                              >  1:65968‑M2/95‑143 (MQ=255)
                                                tcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcatagagttttgctccttctcccaaaccaaCGTTTATCGAAATGAAGAAATAACCATCAAATCGCATCATTCATGCttt                                                                                              >  2:427739‑M2/95‑143 (MQ=255)
                                                 caataccaccagtcataagcggtatagctaggaaaccggtgcgtcctaatgtagccgttgctgcattgagtgttgctccttctcccaaaccaaCGTTCAAGCAACACAAGCAATTACAAGCAAATGGCATCATTCCTGCtttt                                                                                             <  1:635371‑M2/50‑1 (MQ=255)
                                                   agacgaccaatcatgaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAAGAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                                                           <  2:1192950‑M2/52‑1 (MQ=255)
                                                       caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                                                                       >  2:101964‑M2/88‑143 (MQ=255)
                                                       caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTGTATGAAAATGAAGAAATAGCAAGCAAATGGCATCATTCCTGCTGTGACAAgg                                                                                       >  1:203142‑M2/88‑143 (MQ=255)
                                                        cgcactcatgaccgggatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                      <  1:552242‑M2/57‑1 (MQ=255)
                                                        accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                                      <  2:141931‑M2/57‑1 (MQ=255)
                                                         ccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                                                                     >  2:113380‑M2/86‑143 (MQ=255)
                                                            atcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAACCCGTCTTTTACCAGGGGGAt                                                                                  >  2:1006903‑M2/83‑143 (MQ=255)
                                                             tcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCCTCATTCCTGCTTTTACCAGGGggaat                                                                                 >  2:604275‑M2/82‑141 (MQ=255)
                                                              cataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGTAATCATTACTGCTTTTACCAGGGGGAttt                                                                                >  1:226545‑M2/81‑143 (MQ=255)
                                                               ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                               >  1:1195531‑M2/80‑143 (MQ=255)
                                                               ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                               >  1:584966‑M2/80‑143 (MQ=255)
                                                                taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccacCGCTGATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTGCCAGGGGGATTTaa                                                                              >  2:157546‑M2/79‑143 (MQ=255)
                                                                 aacctgtatagttattaaacctttgcgtcctaatgtagccgtttcttcattgagttttgctccttctcccaaaccaaCGTTTATTAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                             <  2:445981‑M2/66‑1 (MQ=255)
                                                                 aaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGGAGATGCGGAAAGAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                                             >  1:623365‑M2/78‑143 (MQ=255)
                                                                          agctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAGGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt                                                                    <  2:171007‑M2/75‑1 (MQ=255)
                                                                            ctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                  >  1:126042‑M2/67‑143 (MQ=255)
                                                                            ctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTGTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCGGGGGGCTTTAacatgctggctgg                                                                  >  1:609910‑M2/67‑137 (MQ=255)
                                                                             cGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGCAAATGAAGAAATAACAAGCAAATGGCCTCATTCCTGCGTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                 >  1:94308/1‑143 (MQ=255)
                                                                              atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACCCGCAAATGAAATCAGTCTTGGTTGTACCAGGGGGATTTAACATGCTTATTGGCt                                                                <  1:575162‑M2/79‑1 (MQ=255)
                                                                                      ggtgcgtcccaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgc                                                        <  1:1003498‑M2/87‑1 (MQ=255)
                                                                                           gtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTTTc                                                   >  1:668205‑M2/52‑143 (MQ=255)
                                                                                             cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACCAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaa                                                 >  2:365248‑M2/50‑143 (MQ=255)
                                                                                             cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaa                                                 >  1:580645‑M2/50‑143 (MQ=255)
                                                                                             cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaa                                                 >  1:788851‑M2/50‑143 (MQ=255)
                                                                                             cctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaa                                                 >  1:1285833‑M2/50‑143 (MQ=255)
                                                                                               tgatggagccgttgctgcattgagttttgctccttcccccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaaca                                               <  2:850644‑M2/96‑1 (MQ=255)
                                                                                                 atgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGCACTACCGGTCGAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa                                             <  1:1138021‑M2/98‑1 (MQ=255)
                                                                                                  aaCCGGGAAACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTGTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                            <  2:565723/143‑1 (MQ=255)
                                                                                                    tagccgttgcttcattgagttttgcgccttctcccaaaccaaCTTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCTGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGa                                          <  1:194668‑M2/101‑1 (MQ=255)
                                                                                                    tagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTAACCAGGGGGATTTAACATGCTTATTGTCTATGTAAGCGTATAAAAAAATGa                                          >  2:177379‑M2/43‑143 (MQ=255)
                                                                                                     gcggACACCAACAGGTAATGCAGAGCCTTCTTCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                         <  2:944870/141‑1 (MQ=255)
                                                                                                         gttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGTCCAGa                                     >  2:133188‑M2/38‑143 (MQ=255)
                                                                                                          ttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                    <  2:789655‑M2/107‑1 (MQ=255)
                                                                                                          ttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                    <  1:29023‑M2/107‑1 (MQ=255)
                                                                                                             ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAacac                                 >  1:819206‑M2/34‑143 (MQ=255)
                                                                                                              tgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAAcaca                                >  1:1201751‑M2/33‑143 (MQ=255)
                                                                                                                 attgagttttgctccttctcccaacccaaCGTTGATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                             <  1:242959‑M2/114‑1 (MQ=255)
                                                                                                                 attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                             <  1:954883‑M2/114‑1 (MQ=255)
                                                                                                                 attgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                             <  1:954846‑M2/114‑1 (MQ=255)
                                                                                                                 aGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                             <  2:1339248/143‑1 (MQ=255)
                                                                                                                  ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATCACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTGTGTACTCGTATCAACAAATGACCAGAACACAGCTc                            >  2:1336123‑M2/29‑143 (MQ=255)
                                                                                                                  ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGACATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTTCGCCGATCAACAAATgacccgcacaaaactc                            >  2:638936‑M2/29‑137 (MQ=255)
                                                                                                                      gttttgctccttctcccaaaccaaCGTTTATGAACATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTAATTGGCTATGTACGCGCATCAACAAATGACAAGAACACAGAGCGACa                        >  2:1086810‑M2/25‑143 (MQ=255)
                                                                                                                      aTGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACCTGCTTATTGGCTATGTACGCGTATCAACAAATCACCAGAACACAGATccagc                        >  2:84371/1‑139 (MQ=255)
                                                                                                                       ttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACaa                       >  2:73505‑M2/24‑143 (MQ=255)
                                                                                                                        tttgctccttcttccaaacctaCGTTTACGAAAATGAAGAAATCACAAGCAAATGGCATCATTCCTGCTGTGACCATGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAc                      <  2:791188‑M2/121‑1 (MQ=255)
                                                                                                                         ttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACg                     <  2:1195531‑M2/122‑1 (MQ=255)
                                                                                                                          tgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGt                    <  2:65968‑M2/123‑1 (MQ=255)
                                                                                                                          agagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGt                    >  1:1310148/1‑143 (MQ=255)
                                                                                                                           gctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                   <  1:752173‑M2/124‑1 (MQ=255)
                                                                                                                             tccttctcccaaaccaaCGTTTATGAAAATGAAGAACTACCAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGCACACAGATCTACAACGTAAt                 >  2:372929‑M2/18‑143 (MQ=255)
                                                                                                                             tccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATAGATCATACCTGTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAGCACAGATCTACAACGTAAt                 >  1:509588‑M2/18‑143 (MQ=255)
                                                                                                                             tccttcgcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAAt                 <  2:623365‑M2/126‑1 (MQ=255)
                                                                                                                               cttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTCCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCCTATCAACAAATGACCAGAACACAGATCTACAACGTCATgc               >  2:140106‑M2/16‑143 (MQ=255)
                                                                                                                                ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCGACACCGTATgcgc             >  2:1296161‑M2/15‑143 (MQ=255)
                                                                                                                                ttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATCATCATCGAATACTTACGCGTACCAACACAGGACCAGAACACAGATCTCCAACGTAGTgcg              >  1:984210‑M2/15‑143 (MQ=255)
                                                                                                                                   gcccaaaccgaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTg           <  1:1224090‑M2/132‑1 (MQ=255)
                                                                                                                                     ccaacccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa         <  1:1054761‑M2/134‑1 (MQ=255)
                                                                                                                                     ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAGGTAATGCGCTGaa         >  2:986242‑M2/10‑143 (MQ=255)
                                                                                                                                     ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa         >  1:1109632‑M2/10‑143 (MQ=255)
                                                                                                                                     ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTATACCAGGGGGATTTAACATGCTCATTGCCTATGTACGCGTATCAACAAATGACCCGAACACACACCTCCACCGCAAGGCGCGgac         >  2:1265178‑M2/10‑142 (MQ=255)
                                                                                                                                      caaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAc        >  1:693943‑M2/9‑143 (MQ=255)
                                                                                                                                      caaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGAGAGTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAc        >  1:508666‑M2/9‑143 (MQ=255)
                                                                                                                                       caaCCAACGTTTACGAGAATGGCGAATGCACACGCCTATGCCTCCATCTGTGCTTTTCCCAGGGGACGTTAACATGCTTATTGCCTATGTACGCGTATCAACAAATGCCCAGAACACAGATCTACAACGTAATGCGCTGAACt       <  2:170267/142‑1 (MQ=255)
                                                                                                                                          ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgtg    <  1:568197‑M2/139‑1 (MQ=255)
                                                                                                                                          ccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgtg    >  1:480179‑M2/5‑143 (MQ=255)
                                                                                                                                            aaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa  <  1:113380‑M2/141‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                            
GTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCA  >  NC_000913/1209477‑1209759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.