| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 104 (1.390) | 69/280 | 0.0 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 138 (1.840) | 77/280 | 0.0 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
TCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCC > NC_000913/2101607‑2101887 | tCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaag < 1:1327001/143‑1 (MQ=255) cTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGACCCGAAACATA‑TTGATATCAGAATAGATACTTTCTTTAGGAATTTTTGTATTGTTaagg > 1:622914/1‑143 (MQ=255) ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaagga > 2:1073764/1‑143 (MQ=255) ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaagga > 2:361984/1‑143 (MQ=255) gTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACAGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTgg > 2:809278/1‑142 (MQ=255) tACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCg > 1:930647/1‑143 (MQ=255) gaCATAAAGTAACCTTGATCGAAGCCATTTACTCGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCg < 2:139944/142‑1 (MQ=255) aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAAt > 1:1057023/1‑143 (MQ=255) actAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGc < 1:849009/141‑1 (MQ=255) tAACCTTGATCGAAGCCATTTACACTCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCgg < 2:582698/143‑1 (MQ=255) ataggctGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATACGCgg > 2:317475/7‑143 (MQ=255) cTTGATCGACGCCATTTACACGCACAAAAACCGAAAAACGTAACAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTGCTTTAGTAATTTCTGTGTTATTCAGGAAGGTGCGAATAAGCGGGGaa > 2:1108214/1‑143 (MQ=255) cTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCggggca > 1:163249/1‑141 (MQ=255) cTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGaa > 2:680697/1‑143 (MQ=255) tCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAAttct > 1:839128/1‑143 (MQ=255) gAAGCCATTTACCCACACACAATCTGAAAAACGTACCAGCATAAATGCTCCTGCGCACCAATGAACA‑ACCGTATCAGAATAGAGACTTTCTTTAGGAATTTTTGTTTTATTAAGGAACGTGCGAATAAGCGGGGAAAttcttc < 1:681326/143‑1 (MQ=255) gAAGCCATTTACACGCACAAAATCTGAAAAAGGTACGCACATAAATGATCCTGCGCACCAATCAACA‑ACCCTATCAGAACAGATACGCTCGTTAGGAATTGTGTGTGTAGTAAGAAAGGTGCGAGTAAGCGGGGAAAttcttc > 2:663854/1‑143 (MQ=255) aaGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATGCTGCGCACCAATCAACA‑ACCGTATCAGACTAGATACTTTCTCTAGGAATTTTTGTTTTATTGAGGGAGGTGCGGATAATTGGAGAATttctgtg > 2:204920/1‑140 (MQ=255) gCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAATGAAGGTGCGAATAAGCGTGGAATTTCTtctct > 2:248180/1‑142 (MQ=255) cccaactACACGCACATAATCTGAAAAACCTACCAACATAACTGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTGTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCg < 1:1330255/137‑1 (MQ=38) ccATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCgg > 2:28424/1‑143 (MQ=255) cATTTACACGCACAAAATCTGAAAAACGTACCTGCATAAATGATCCTTCGCACCAATCAACA‑ACCATATCAGAATCGATACTTTCTTTAGGAATTTTTGTTTTATTAAGTAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGc < 2:1251510/143‑1 (MQ=39) gtttACCCGTACAACATCTGAAAACCGTACTAGCATGAATGATCCTGTGTA‑CAATTAGTATAAAGTATCCGAATCGATACTTTCTTTAGGAATTTTTGTTTTATGTTTTTCGGTGCTAATAAGCGGGGAAATTCTTCTCGGCt < 2:663802/142‑1 (MQ=255) aTTTACACGCACAAAATCTGAAAAACGTGGCAGCGTAAATGAGCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAACTTCTTCTCGGCt > 2:1109446/1‑143 (MQ=39) aTTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt > 2:1182904/1‑143 (MQ=255) tttACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg < 2:724398/143‑1 (MQ=255) ttACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGTTGCGAATAAGAGGAGAAATTCTTCGCGGATGa > 2:695547/1‑143 (MQ=255) ttACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAACTCTTGTGTTAGTAGGGACGATTTTATTAAGCAGGGGAATTCTTCTCGGATGa > 2:1013057/1‑143 (MQ=255) cacGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTc > 1:846124/1‑143 (MQ=255) acGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa < 1:471786/143‑1 (MQ=255) cGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACTAATCAACT‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAg < 2:1244213/143‑1 (MQ=255) cGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACGCAg > 2:1101101/1‑143 (MQ=255) gCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGt < 1:1163938/143‑1 (MQ=255) gCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGt < 2:571658/143‑1 (MQ=255) gCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGt < 2:571841/143‑1 (MQ=255) agaaaaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAAGCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca < 1:299003/141‑1 (MQ=255) acaAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca > 2:1296226/1‑143 (MQ=255) acaAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca > 2:1052583/1‑143 (MQ=255) aaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcattgc > 1:346306/1‑141 (MQ=255) aaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGAGAATAAGCGAGGAAATTCTTCTAGGCTGACTCAGtaatttc > 2:72039/1‑143 (MQ=255) tCTGAAAAACGCACCAGCATAAATGAGCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat < 1:285895/143‑1 (MQ=255) cTGAAAAACGTACCAGCATAAATGATCCTGCTCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcatt < 1:152542/143‑1 (MQ=255) tgcaaacCGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATCCCTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt < 1:1147465/140‑1 (MQ=255) aaaaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGACTCAGCGGGGCAATTCTTCTCGGCTGACTCACTCATTGCATtcct > 2:767386/1‑143 (MQ=255) aaaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttctt < 2:1057023/143‑1 (MQ=255) aaaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttctt < 1:527791/143‑1 (MQ=255) aaaaCGAACCAGGATAAATGATCCTGCGCACCAATCAACC‑ACCGTATCAGAATAGATACGTTCTTTAGGAATTTTTGTTTTCGTAAGGAAGGTGCGAATAAGCGGGAAAATTCTTCTCGGCTGACTCAGTCATTTCATttctt < 2:369208/143‑1 (MQ=25) aaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttcttc > 2:687782/1‑143 (MQ=255) aaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttcttc > 1:79373/1‑143 (MQ=255) aCCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTACGGAAGGTGCGAATAAGCGGGGCAATTCTTCTCGGCTGACTCACTCATTTCATCTCTTCATGttt > 1:593459/1‑143 (MQ=255) aCCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCTGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt < 2:566819/143‑1 (MQ=255) aCCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt > 1:1161918/1‑143 (MQ=255) aCCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt < 2:1351530/143‑1 (MQ=255) ccAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTg < 2:295653/143‑1 (MQ=255) cAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGa > 1:388343/1‑143 (MQ=255) aTCCGGCGCACCGATCAACA‑GCCGTATCAGAATAGATCCGTTCTTTAGGAATTTCTGTCGTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt < 2:1025740/143‑1 (MQ=18) tCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCCTTAGTAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc < 2:955197/143‑1 (MQ=255) ccTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtct > 2:1146498/1‑143 (MQ=255) cTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtctc < 1:1213729/143‑1 (MQ=255) gcgcACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc > 1:104162/1‑143 (MQ=255) cACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCATa < 1:384130/143‑1 (MQ=255) aCCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa > 1:1152520/1‑143 (MQ=255) ccAATCAACA‑ACCGTATCAGAATAGATACGTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTGTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa < 2:707034/143‑1 (MQ=255) cAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCTTGTTTGAGCCGATTTTTTCTCCCGTAAAt > 2:712624/1‑143 (MQ=255) aTCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTTTTAAGTAAGTTGCGAATAAGTGTGGTTATTTTTCTCGGCTGTTTCAGTCATTTTATTTTTTCATTTTTGTTCCGTTTTTTTCTCCCGTATATGc > 2:1150277/1‑143 (MQ=255) aaca‑acCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt < 1:28424/143‑1 (MQ=255) a‑acCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa < 2:930647/143‑1 (MQ=255) aggagcAGAATGGAGACGTTCTTTAGGAAGTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCGCGGCGGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTGTTTCTCCCGTAAATGCCTTGAATCa < 2:381301/138‑1 (MQ=17) tATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTCCGAATACGCGGGGAAATTCTTCTCGGCTGACTCAGTCCTTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGTATCAGc > 1:664205/1‑143 (MQ=255) aGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAt < 1:317475/143‑1 (MQ=255) gAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGTCTGACTCAGTCAGTTCATTTGTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCATCCTCtt > 1:718190/1‑143 (MQ=18) gAATAGATACTTTCTCTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAtt < 1:616552/143‑1 (MQ=255) aCTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGt > 1:813834/1‑143 (MQ=255) gtttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGtt < 2:944913/142‑1 (MQ=255) ttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg < 2:388343/143‑1 (MQ=255) ggAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTCAATCAGCCTATTTAGACCGCTTCTTCGccc > 2:622571/1‑142 (MQ=255) taaTTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAt < 1:809278/142‑1 (MQ=255) ttttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTaa < 2:1152520/143‑1 (MQ=38) tttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCAATTTAAg > 1:905297/1‑143 (MQ=38) ttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAgg < 1:839953/143‑1 (MQ=37) ttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATATAAgg < 1:361984/143‑1 (MQ=37) tGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGc < 1:726353/143‑1 (MQ=35) gTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCg < 1:1265719/143‑1 (MQ=35) ttttATTAAGGAAGGTGCGAATAAGCGGGGAGATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCTTATTTATTCGGTATCTTCGTCATTTAAAGCGt > 1:337562/1‑143 (MQ=11) tttgATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTCTTCTCCCGTAAATGCCTTGAATCAGCCTAGTTAGACCGTTTCTTCGCCACTTCAGGCga > 2:588323/1‑142 (MQ=11) tttATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCCGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAAACCGTTTCTTCGCCATTTTAGGCGtt > 1:458828/1‑143 (MQ=16) ttaAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATct > 2:937021/1‑142 (MQ=11) | TCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACA‑ACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCC > NC_000913/2101607‑2101887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |