New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =6 (0.080)54 (0.860) 47/250 0.2 82.9% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 17 (0.270)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 142 total aligned reads displayed.

GGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGC  >  NC_000913/1207650‑1207931
                                                                                                                                            |                                                                                                                                             
tgtggaTGCATCCGGTTCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                             <  1:1130323‑M1/142‑1 (MQ=255)
gcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTg                                                                                                                                             >  1:684468‑M1/141‑143 (MQ=255)
   ggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                          <  1:714179‑M1/143‑1 (MQ=255)
      ttgcgcgcgttacgttgctgatcttggtgctggtcatttgttgctacgcgtacatagccaatgagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                       >  2:502991‑M1/135‑143 (MQ=255)
      ttcatcgcatgacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatcccctttgtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                       >  2:253305‑M1/135‑143 (MQ=255)
      ttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccgataaggatgttaaatgcctctggtcaaagcaagaatgatgccatttgcttgttatttgctcctcttcatcaacggtgggctgg                                                                                                                                       <  2:510337‑M1/9‑6 (MQ=255)
      ttcagcgcatgacggtgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                       >  1:501034‑M1/135‑143 (MQ=255)
      ggCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                       <  1:460874‑M1/143‑1 (MQ=255)
       tcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                                                                      >  1:975194‑M1/134‑143 (MQ=255)
          gcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGggagt                                                                                                                                   <  1:928179‑M1/13‑2 (MQ=255)
           cgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGaa                                                                                                                                  <  2:1231531‑M1/14‑1 (MQ=255)
            gcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacaGTGGGTTGGGCgaaa                                                                                                                                 <  2:690331‑M1/15‑2 (MQ=255)
            cGGTGCCAGCCCCGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAG                                                                                                                                 <  1:469438‑M1/143‑1 (MQ=255)
             ggTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                <  1:929556‑M1/143‑1 (MQ=255)
             ggTGCCAGCCTGGAGAAGGAGCGGCAAGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCCTGGATTGCGAGAAGG                                                                                                                                >  2:1289128‑M1/1‑143 (MQ=255)
               ttacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgtgaaatcgccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                              <  2:272251‑M1/18‑1 (MQ=255)
                 ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCCCTGTGCCACCGGCCCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                            >  2:263934‑M1/1‑139 (MQ=255)
                 ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                            <  1:547840‑M1/143‑5 (MQ=255)
                  cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATGCGCTTGGCGATATCAAATCGGATGGGACTGTGCAAACGGCTCTAGAAAACGCTGGTTTGGGAGACGGgcctg                                                                                                                           >  2:969892‑M1/1‑138 (MQ=255)
                  cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg                                                                                                                           <  1:1022933‑M1/143‑6 (MQ=255)
                   aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                          <  1:1225244‑M1/143‑7 (MQ=255)
                    gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAGATCGGATGGCCCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgca                                                                                                                         >  1:1472‑M1/1‑136 (MQ=255)
                        ggggaaggGGCGGCACGACCAGTTACTTAGTGCACGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                     <  2:863548‑M1/140‑12 (MQ=255)
                        atatctttgttctggtcatttgttgatacgcgtacatagccaataaggatgttgcgaccccctagtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                                                                     >  1:941117‑M1/117‑143 (MQ=255)
                        agatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaagccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                                                                     >  1:1268878‑M1/117‑143 (MQ=255)
                         gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcactacc                                                                                                                    <  2:524571‑M1/143‑13 (MQ=255)
                           tctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatgtcttcattttcataaacgCCGGAGTGGGACAAGGAGCACAACTCAATg                                                                                                                  <  2:1117066‑M1/30‑1 (MQ=255)
                            ctgttttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                 >  2:899970‑M1/113‑143 (MQ=255)
                              ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                               >  1:944808‑M1/1‑126 (MQ=255)
                                 ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaacgcagtaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                            <  2:624909‑M1/36‑1 (MQ=255)
                                 gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtg                                                                                                            >  2:1231605‑M1/1‑123 (MQ=255)
                                   ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCACATCGGATGGCACTGTGCAAACGGCTCTCGACAACCTTGGTTTGGGAGCGTGAGCAAAAATCAATGCATCACCg                                                                                                          >  1:737034/1‑143 (MQ=18)
                                   ggcACGACCAGTTACTTACCGCACTTCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc                                                                                                          <  1:778999‑M1/143‑23 (MQ=255)
                                      aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGCTATCAAATCGGATGGCCCTGTGCACACGGCTCTCCAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttgctgtcccg                                                                                                       >  1:14922‑M1/1‑118 (MQ=255)
                                       tcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCACCGGCTa                                                                                                      <  2:341258‑M1/42‑1 (MQ=255)
                                       tcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                      >  1:1254770‑M1/102‑143 (MQ=255)
                                          tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAAATCAATGCAGCCACGgctagat                                                                                                   <  2:1033767‑M1/45‑4 (MQ=255)
                                          ccAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTAGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                                                                   >  1:806816‑M1/1‑114 (MQ=255)
                                           cAGTTACTTCTTGCAGTTCGGGCGCTGCTGTTAAGGCGCAAGAATGGGTTTGGTTAGACCAAAACGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttcc                                                                                                  <  1:591417‑M1/143‑31 (MQ=255)
                                            tgttggtgcgcgtacctagccaatacgcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                 >  2:1014794‑M1/97‑143 (MQ=255)
                                            tgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                 >  1:396280‑M1/97‑143 (MQ=255)
                                            tgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgacgccatttgcttgttatttcctcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                 >  1:225479‑M1/97‑143 (MQ=255)
                                              ttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                               <  2:793871‑M1/49‑1 (MQ=255)
                                                 cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                            <  1:610774‑M1/143‑37 (MQ=255)
                                                     gcgtacatagccaataagcatgttaaatccccatggtaaaagcaggaatgatgacatttgcttgttatttctccattttcataaccgCTGGTTTGGGAGAAGGAGCAAAACTCACTGAAGCAACGGCTACATTCGGGCGCAcc                                                                                        <  2:419794‑M1/56‑1 (MQ=255)
                                                     ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                        <  1:1140251‑M1/143‑41 (MQ=255)
                                                      cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                                                       >  1:98530/1‑143 (MQ=255)
                                                       gtacatagccaataagcatattaaaaccccctggtaaaagcaggaatgaagccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTGGGACGCACCgg                                                                                      <  2:179914‑M1/58‑1 (MQ=255)
                                                         aCTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                                                    <  1:822422/143‑1 (MQ=255)
                                                           tgcgcgcgctGCGGTGAAGCCGCGAGAGTCCGTTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact                                                                                  <  1:258165‑M1/141‑47 (MQ=255)
                                                             agccaataagaatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                >  2:475375‑M1/80‑143 (MQ=255)
                                                              gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                               <  1:493749‑M1/65‑1 (MQ=255)
                                                               cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgggtccgtggccttgagccactccgc                                                                              >  1:379838‑M1/1‑93 (MQ=255)
                                                               cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAACCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgc                                                                              >  1:1225171‑M1/1‑93 (MQ=255)
                                                               cgaattagtatgttaaatccctctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                              >  2:932330‑M1/78‑143 (MQ=255)
                                                               ccaataagcatgttaaatccccctggtaaaagcaggactgataccattggcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTCGATTAGGGCGCACCGGTTTCATAg                                                                              <  2:1055620‑M1/66‑1 (MQ=255)
                                                                    tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaca                                                                         >  2:173685‑M1/1‑88 (MQ=255)
                                                                        gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccacccacacgct                                                                     >  1:1175388‑M1/1‑84 (MQ=255)
                                                                         tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttctttattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                    >  1:9679‑M1/68‑143 (MQ=255)
                                                                              cgccAAGGATGCGTTTGTCGATATCAATTCGGCTGGGACTTGGCAAACGGCTGTCGAAAACCTGGGTTTGGGAGAAGGAGCAAAACTCATTGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                               <  2:1293190/140‑1 (MQ=255)
                                                                               cGCAAGAATCCGGTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaa                                                              <  1:797432‑M1/143‑67 (MQ=255)
                                                                               atccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                              <  1:831576‑M1/82‑1 (MQ=255)
                                                                                 ccccctggtaaaagcaggaatgatgccagttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTTAATGCAGCAACGGCTACATGAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                            >  1:272251‑M1/60‑143 (MQ=255)
                                                                                 cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaat                                                            <  2:651979‑M1/143‑69 (MQ=255)
                                                                                  ccccttgtaatcggaggaatgatgccatttgctggttatttcgtcattttcataaacgTTGGTTTGGGAGAAGGCGCAAAACTCAATGCAGCACCGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                           >  2:406596‑M1/59‑143 (MQ=255)
                                                                                    cctggtatatgcagtaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                         >  2:356942‑M1/57‑143 (MQ=255)
                                                                                        ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacacgctgcccgaaatgcaatgg                                                     >  2:598028‑M1/1‑68 (MQ=255)
                                                                                         taaaaccaggaatgatgccacttgcttgttatctcgtcattttcatagacgTTGGTTTGGGAGAAGGATCAAAACTCAATGCAGCAACGGCTACAGTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                    >  1:280132‑M1/52‑143 (MQ=255)
                                                                                           tttGGCGATATCAAATCGGATGGGACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                  <  2:375989/143‑1 (MQ=255)
                                                                                           aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                  <  2:812863‑M1/94‑1 (MQ=255)
                                                                                           aaagcaggaatgatgccagttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAGCGGGGTTATAGCTATACCGGTTATGATTGGTGGTATTGa                                                  >  1:885709‑M1/50‑143 (MQ=255)
                                                                                               gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcggccactccgccaacaggctggctgaaatgcaatggggccgct                                              >  1:114821‑M1/1‑61 (MQ=255)
                                                                                                cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctt                                             >  1:557490‑M1/1‑60 (MQ=255)
                                                                                                aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAATCTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTAGTGGTATTGAGCAAt                                             <  2:782187‑M1/99‑1 (MQ=255)
                                                                                                aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                             <  1:16779‑M1/99‑1 (MQ=255)
                                                                                                 gATACCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                            <  1:820585‑M1/143‑85 (MQ=255)
                                                                                                  atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttt                                           <  1:720337‑M1/143‑86 (MQ=255)
                                                                                                        aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgct                                     >  1:66887‑M1/1‑52 (MQ=255)
                                                                                                                gcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTGCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTCATCAttcaatg                             <  2:175082‑M1/115‑4 (MQ=255)
                                                                                                                  ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                          <  1:446889‑M1/102‑1 (MQ=255)
                                                                                                                  ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                          >  2:446889‑M1/27‑128 (MQ=255)
                                                                                                                  cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggcgccgatttttctgctgaagaatacc                           >  1:1075706‑M1/1‑42 (MQ=255)
                                                                                                                   aCTGTGGCAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc                          <  2:1158834‑M1/143‑103 (MQ=255)
                                                                                                                   aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctggagaataccc                          >  1:1092190‑M1/1‑41 (MQ=255)
                                                                                                                     tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgg                        <  1:951137‑M1/143‑105 (MQ=255)
                                                                                                                       aattcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                      <  1:883818‑M1/122‑1 (MQ=255)
                                                                                                                           cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCACTCAGTGGGGCTGGAATg                  <  2:244956‑M1/126‑1 (MQ=255)
                                                                                                                              ggCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa               >  1:524010‑M1/1‑30 (MQ=255)
                                                                                                                              gaattccataagcgTTGGTTTGGGAGAAGGAGCAAGACTCAATGCAGCCGCGGCTACCTGAGGACGCACCGGTTTCATAGCTATACCGGTGATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCg               >  1:477912‑M1/15‑143 (MQ=255)
                                                                                                                               atcttcatcaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTGCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc              >  2:128491‑M1/14‑143 (MQ=255)
                                                                                                                                 tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACATTAGGACGCACCGGTGTCATAGCTAGACCGCGTATGATTTGAGGTATGGAGCAATCCGTAATCATTCAGTGGGGGTGGAATGCCGCaa            <  2:766813‑M1/132‑1 (MQ=255)
                                                                                                                                 tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg            >  2:803628‑M1/1‑27 (MQ=255)
                                                                                                                                    cGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctt         >  1:271108‑M1/1‑24 (MQ=255)
                                                                                                                                     gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctctttctgctgaagaatacccggcactggcaaaggctta        >  2:1015774‑M1/1‑23 (MQ=255)
                                                                                                                                     gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagactagctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctta        >  1:1038087‑M1/1‑23 (MQ=255)
                                                                                                                                     gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgggtccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgggactggccaaggctta        >  2:926900‑M1/1‑23 (MQ=255)
                                                                                                                                       aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGAGGTGGAATGCCGCAAAAGCAt      <  2:708151‑M1/138‑1 (MQ=255)
                                                                                                                                       aaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc      >  1:726824‑M1/1‑21 (MQ=255)
                                                                                                                                       aaaCCTAGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc      <  2:806816‑M1/143‑123 (MQ=255)
                                                                                                                                           cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttgtccgac  >  1:335710‑M1/1‑17 (MQ=255)
                                                                                                                                            |                                                                                                                                             
GGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGC  >  NC_000913/1207650‑1207931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.