| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,547,879 | Δ1 bp | coding (479/3048 nt) | fdnG → | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,547,879 | 0 | C | . | 96.7% | 245.9 / 1.9 | 61 | coding (479/3048 nt) | fdnG | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base . (30/28); minor base G (1/1); total (31/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCAGGTTCTGACAAATGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTTCTACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACGGTAGCAAGTCTTGCT > NC_000913/1547746‑1548015 | ccAGGTTCTGACAAATGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGAACGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATg > 1:78384/1‑143 (MQ=255) cAGGTTCTGACAAATGGCAGCGCATTAGCTGGGAAGAAACATTCTCCCGGATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGc > 1:223134/1‑143 (MQ=255) gTTCTGACAAATGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCtgt < 2:149005/143‑1 (MQ=255) tCTGACGCATGGCCGAGCATTATCGTGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATGGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCtgtgt < 2:558897/143‑1 (MQ=255) acTGACAAATGGCAGCGCAGTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCGGACCGTGCCGCTAACATTATTGTTAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCtgtgt < 1:860803/142‑1 (MQ=255) gACAAATGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGcc > 2:468059/1‑143 (MQ=255) aCAAATGGCAGCGCATTAGCTGGGAAGAAGCATTATCCCGAATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATGTAATAGAACGAGAAGGGCGTAACGGGAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCt > 1:734155/1‑143 (MQ=255) aaTGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCg < 1:981093/143‑1 (MQ=255) aTGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTGTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCgg < 2:937666/143‑1 (MQ=255) tGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGAGAAGCAAATGACAACAGACCCCGCCGCCGGCGTTACTGGAAATGACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGt > 1:546656/1‑143 (MQ=255) tGGCAGCGAACTAGCCGGGAAGAAGCATTCTCCCGTATTGCGAAGCGGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGt < 1:1042362/143‑1 (MQ=255) gCAGCGCATTAGCGGGGAAGAAGCATTCTCCCGTATGGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGc < 2:428760/143‑1 (MQ=255) aGCGCATTAGCTGGGAGGAAGCATGCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTGTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCa < 1:1099826/143‑1 (MQ=255) agtAGCTGGGAAGAAGCAGTCCCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAAc < 1:184507/141‑1 (MQ=255) gCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTATATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTTCGCTGCCAGCCACGacc > 1:395745/1‑141 (MQ=255) tGGGGAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAAcc < 2:509528/143‑1 (MQ=255) tGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGGACGAGCAGGGCGTAACGGTAAACCG‑TCGAGTTGTACCGGTACCGTGTGGCCCTCCGGTGCCAGCAAGGacacg > 2:1178324/1‑142 (MQ=255) tGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAAcc > 1:623788/1‑143 (MQ=255) gggAAGAAGCATCCGCCCGAATTGCGAAGCTAATGAAAGCTGAGCGTGACGCTAACTGTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTGGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCg < 2:666053/143‑1 (MQ=255) ggAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCCAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCgg < 1:459667/143‑1 (MQ=255) aagaagCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGa < 2:275888/143‑1 (MQ=255) gaagCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGACCCCGGGATg > 2:1162739/1‑143 (MQ=255) cATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCACCGACACCGGGAGGCTGa > 2:608251/1‑143 (MQ=255) cATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGa > 1:661001/1‑143 (MQ=255) tgctcCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGAcc < 1:1150365/141‑1 (MQ=255) tcCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAg > 1:872881/1‑143 (MQ=255) ccGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGACAAGAACGAGCAGACCGACACGGTAAACCGTTGCCTTT‑TACCGGTATGCTGTGTGCCTCCGGCGCCCGCACCGCAACCGGGATGCTGACCgagac > 2:195203/1‑142 (MQ=255) cGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAACAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGGCCGCAAAGAAACCGGGATGCTCACACAGaaa > 2:55139/1‑143 (MQ=255) tATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGACGCTGACCCAGACAtt > 2:547604/1‑143 (MQ=255) cGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAACGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCGGAAAATTGccc > 1:391949/1‑143 (MQ=255) cGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAGCGGAACCGGGATGCTGACCCAGAAAGTTcccc > 2:863649/1‑143 (MQ=255) cGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGccc < 1:636269/143‑1 (MQ=255) aaGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGc < 1:256197/143‑1 (MQ=255) atgaAAGCTGACCGTGACGCTAACTTTATTGAAAAGAAGGAGCAGGGCGTAACGGTAAACCGGTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGGCCCGGAGAGTTGCCCGCTCCCTc > 1:1022537/1‑143 (MQ=255) atgaAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCGGCACCGACACCGCGATGCCGACCCCGCAATTTGCCCGCTcccca > 2:436269/1‑141 (MQ=255) gCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATg > 2:681154/1‑143 (MQ=255) gCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAAGTTGCCCGCTCCCCCGGGATg > 2:975891/1‑143 (MQ=255) tGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAACCCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCt > 1:684841/1‑143 (MQ=255) tccGTGACTCTAACTTTATTCAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTgg < 2:160617/142‑1 (MQ=255) cGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTAGCTTT‑TACCGGGATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATTCTGAAACAGAAATTTTACAGCTCCCTAGGGATGCTGGCg > 1:108009/1‑143 (MQ=255) gTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCgg < 1:1036833/143‑1 (MQ=255) gTGACGCGAACTTGATTGAAAAGAACGAGCAGGGCGTAATGGTAAACCGTTGGCTTT‑TACCGGTATGCGGTGTGCCTCCGGGGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCgg < 1:466064/143‑1 (MQ=255) gACGCTAAATGTAGTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGAGGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTa < 2:1164890/143‑1 (MQ=255) cccTAACGTGATTGCAAAGGACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGa < 2:1009013/141‑1 (MQ=255) tAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACaa > 1:702218/1‑143 (MQ=255) aaCTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCACCGAAACCGGGATGCTGACCCAGGAATTTGCCCGCCCCGTCGGGATGCTGGCGGCACACAAc > 2:369848/1‑143 (MQ=255) ttGAAAAGAACGAGCAGGGCGTAACGCTATACTGTTGGCTTT‑TACCCGTATGCTGTGTCCCTCCGGTGTCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCTGCTCCCTCTGGATGCTGGCGGTAGACAACCAGgcgc < 2:831268/143‑1 (MQ=255) gAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGgcgcgc > 1:185295/1‑143 (MQ=255) aaaaGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACCACCAGGcgcgcg > 2:752654/1‑143 (MQ=255) aaaaGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGATGAGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTACACGCACCCTCAGGCTGCAGTCGGTCGACAACCAGCcgcacg > 2:1077154/1‑143 (MQ=255) aaaGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTTCGGTGCCAGCAACGAAACCGGGATGGTGACCCAGAAGTTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGcgcgcgg > 2:586166/1‑142 (MQ=255) aaaGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGt < 2:661001/143‑1 (MQ=255) aaCGAGCAGGGCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGGGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGa < 1:880005/143‑1 (MQ=255) aaCGAGCAGGGCGTAACGGTAAACCCTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGa < 2:409514/143‑1 (MQ=255) ggCGTAACGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTCGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGACGCGCGCCTGACACGGACCa > 2:476557/1‑143 (MQ=255) ggaaCGGTAAACCGTTGGCTTT‑TACCGGTATGCTGTGGGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACg < 1:512462/141‑1 (MQ=255) ccGGTAAACGGTGGGC‑TTGTAGCGGTGTGCTGTGTGCCTCCGGTGCCAGCAACGAAATCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACGGTa < 2:752456/142‑1 (MQ=38) gTAAACCGTTGGCTTT‑TACCGGTATGCTGTGTGCCTCCGGTGCCAGCAAGGAAACAGGGATGCTGACCCAGAAATTTGACCGCGCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCCTCTGACACCGACCCGCGgcagca > 2:321865/1‑143 (MQ=255) aaCCGTTGGCTGT‑TACCGGTATGCTGTGTGCCCCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACGGTAGCAAGt < 1:276518/143‑1 (MQ=255) gTTGGCTTT‑GACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACGGTAGCAAGTCTTg < 1:468059/143‑1 (MQ=255) tGGCTTTC‑ACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACGGTAGCAAGTCTTGCt < 1:398445/143‑1 (MQ=255) | CCAGGTTCTGACAAATGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTTCTACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACGGTAGCAAGTCTTGCT > NC_000913/1547746‑1548015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |