Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908 258683 776 74 [0] [0] 74 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)66 (1.080) 53/268 0.1 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers

CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTG  >  NC_000913/258545‑258824
                                                                                                                                           |                                                                                                                                            
taaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg                                                                                                                                           >  1:988024‑M2/140‑143 (MQ=255)
 aaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGc                                                                                                                                          >  2:764765‑M2/139‑143 (MQ=255)
 aaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtagagtcgtgaaggtaAGTGc                                                                                                                                          >  1:704651‑M2/139‑143 (MQ=255)
  aaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa                                                                                                                                         >  1:704935‑M2/138‑143 (MQ=255)
     atttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAg                                                                                                                                      <  1:655097‑M2/9‑1 (MQ=255)
         gctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa                                                                                                                                  <  1:179729‑M2/13‑1 (MQ=255)
          cttaatttggccaattgggtaaaacaggtgcagcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccctatattcgtgaaggtaAGTGCAAAGAtaac                                                                                                                                 <  2:218991‑M2/14‑2 (MQ=255)
          ctaaattttgctaatttggtaaaacagctgcagcacaacagcagatagaaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtggaggtaAGTGCAAAGATAAt                                                                                                                                 <  2:739746‑M2/14‑1 (MQ=255)
           taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                >  1:742393‑M2/129‑143 (MQ=255)
           taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgcatcttcgtgaaggtaAGTCCAACGCTAATc                                                                                                                                >  1:579426‑M2/129‑143 (MQ=255)
            aaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgcatattcgtgaaggtaAGTGCAAAGATAGTCg                                                                                                                               >  2:1095681‑M2/128‑143 (MQ=255)
            aaatttggccaatttggtaacacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCg                                                                                                                               <  1:586745‑M2/16‑1 (MQ=255)
                     caatctagtaaaacagctgcatcacaacagctgatagctataacgttaccgatgggacacccgaagagcatattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt                                                                                                                      <  2:699146‑M2/25‑1 (MQ=255)
                     caacttggtaaaacacttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt                                                                                                                      <  2:468377‑M2/25‑1 (MQ=255)
                      aatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc                                                                                                                     >  1:101944‑M2/118‑143 (MQ=255)
                        tttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGa                                                                                                                   <  1:667584‑M2/28‑1 (MQ=255)
                        tttggtaaaacagtggcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGa                                                                                                                   <  2:30517‑M2/28‑1 (MQ=255)
                           ggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagatagatcaaaaaatttaccgcactaggcccgtatattcgtgaaggaaAGTGCAAAGATAATCGATTCTTTTTCGattc                                                                                                                >  2:927123‑M2/113‑142 (MQ=255)
                               aaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgacgagtAGTACAAAGATAAGCGATTCTTTTTCGATTGTCTg                                                                                                            >  1:488604‑M2/109‑143 (MQ=255)
                                 acagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaCGTGCAAGGATAATTGATTCTTTTTCGATTGTCTGGc                                                                                                          >  1:366342‑M2/107‑143 (MQ=255)
                                  cagtggcaccacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCt                                                                                                         <  2:1109355‑M2/38‑1 (MQ=255)
                                      tgcagcacaacgggagatagcaatgacgtgaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAt                                                                                                     <  2:321944‑M2/42‑1 (MQ=255)
                                       gcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccggatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCtgtgtg                                                                                                    >  1:649983‑M2/101‑143 (MQ=255)
                                        catcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatcttcaggaagggaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTGTGc                                                                                                   >  1:856155‑M2/100‑143 (MQ=255)
                                        catcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc                                                                                                   <  1:940035‑M2/44‑1 (MQ=255)
                                          cgacggcaggagcgatcaaggacgctaccgtgtgtacagccgaagagcagattgatcaacaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGt                                                                                                 <  2:562132‑M2/46‑1 (MQ=255)
                                              aacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAc                                                                                             >  1:947967‑M2/94‑143 (MQ=255)
                                                 aggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTg                                                                                          <  1:134144‑M2/53‑1 (MQ=255)
                                                  ggagatagcaatgacgttaccgagtgggcccccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGa                                                                                         <  2:385210‑M2/54‑1 (MQ=255)
                                                       tagcaatgacgttaccgagtggacacccgaagagccgattgatcaaaaaatttaccgcactaggcccgtgtcttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTATATGACTGTAAACGTCAACATGAAacct                                                                                    >  1:563368‑M2/85‑142 (MQ=255)
                                                        agcaatgacgtcaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCTATTGTCTGGCTGTATGCGTCAACGTGAAACCgg                                                                                   <  1:20877‑M2/60‑1 (MQ=255)
                                                                cgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGCCAACGTGAAACCGGCACCGGaa                                                                           >  2:987123‑M2/76‑143 (MQ=255)
                                                                    accgagtggacgcccgaagagcagagtgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGc                                                                       <  1:500050‑M2/72‑1 (MQ=255)
                                                                     ccgagtggacacccgaacagcagattgatcaaaaactttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCg                                                                      <  1:1079758‑M2/73‑1 (MQ=255)
                                                                      ggagttgacacccgaagagcagattgatcaaaacatgtcccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                                                                     <  2:633072‑M2/74‑1 (MQ=255)
                                                                        agtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGa                                                                   <  1:570908‑M2/76‑1 (MQ=255)
                                                                          tggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAAt                                                                 >  2:650309‑M2/66‑143 (MQ=255)
                                                                              aacccgaagagcagtttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTg                                                             <  1:1095483‑M2/82‑1 (MQ=255)
                                                                               acccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgg                                                            <  1:764765‑M2/83‑1 (MQ=255)
                                                                               acccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgg                                                            >  1:758603‑M2/61‑143 (MQ=255)
                                                                                 ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattggtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGATGTGCGGGAGTGCtggga                                                          >  2:534373‑M2/59‑142 (MQ=255)
                                                                                 ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                                                                     <  2:612850‑M2/74‑1 (MQ=255)
                                                                                 ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                                                                     >  1:612850‑M2/59‑132 (MQ=255)
                                                                                 ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGGGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAGGCGTCAACGTGAAACCGGCACCGGAAGTGCATGAAAACTgggg                                                          >  1:675999‑M2/59‑143 (MQ=255)
                                                                                  cgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCCCCGGACGTGCCTGCATTCTGGGGc                                                         >  2:614211‑M2/58‑143 (MQ=255)
                                                                                  cgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGc                                                         >  1:337077‑M2/58‑143 (MQ=255)
                                                                                   gaagagcagattgatcaaagaggttaccgcactaggcccgtatattcgtgaaacgaATTGCAAAGCTAGTGGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCt                                                        <  2:520797‑M2/87‑1 (MQ=255)
                                                                                      gagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggt                                                     <  2:988024‑M2/90‑1 (MQ=255)
                                                                                         cagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGACTTCTGGGGCTGGtgga                                                  >  2:1155059‑M2/51‑143 (MQ=255)
                                                                                          agatcgatcaaaaaatctaccgccctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCGTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggat                                                 <  1:475935‑M2/94‑1 (MQ=255)
                                                                                           gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                                <  2:742393‑M2/95‑1 (MQ=255)
                                                                                               gatcaaaaaatttaccgcactaggcccgaatagtgtggaaggtaAGTGCAAAGATAATCGATTCTTTGTCGATTGTCTGGGTGTATGCGTCAACGTGAAACCGGCACCGGAAGGGCGTGAATTCTGGGGCGGGTGGATGGAGc                                            >  2:714547‑M2/45‑143 (MQ=255)
                                                                                                atcaaaatctgtaccgcactgggcccggatcttcgtgaaggcaAGTGCAAAGATAATCGATTCTTTTGCGCGTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCt                                           <  2:23526‑M2/100‑1 (MQ=255)
                                                                                                atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGCTGGTCTGTCCGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCt                                           >  1:917535‑M2/44‑143 (MQ=255)
                                                                                                atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTTGCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGCAGTTCGTGAATTCTGTGGCTGGTGGATGGAGCt                                           >  1:634862‑M2/44‑143 (MQ=255)
                                                                                                atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCt                                           >  2:488011‑M2/44‑143 (MQ=255)
                                                                                                 tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTg                                          >  1:402377‑M2/43‑143 (MQ=255)
                                                                                                   aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCCCCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGa                                        >  1:1122795‑M2/41‑143 (MQ=255)
                                                                                                    gcatctttaccgcactagtcccgtctagtcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTGTGGCTGTATGCGTCAACGTGAACTCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaa                                       <  2:323804‑M2/104‑1 (MQ=255)
                                                                                                          ttaccgcactaggcccgtatatttgtgtaggtaAGTGCAAAGATTATCGATTCTTTTTCTATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAg                                 <  1:929487‑M2/110‑1 (MQ=255)
                                                                                                                            atattcgtgaaggtaAGTGCAAAGATAATCGCTTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAGTCCCGTTTTAGCtaa               >  2:454296‑M2/16‑142 (MQ=255)
                                                                                                                            atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTAAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGGTGGGAGCGGCGGAATCCCGTTTGACTTAc               >  2:450522‑M2/16‑143 (MQ=255)
                                                                                                                             tattcgtgagggtaAGTGCAAAGAGAATCGATTCTTTTTCGAGTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCATGAATTCTGGGGCTTGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACa              <  2:272687‑M2/129‑1 (MQ=255)
                                                                                                                               ttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAGTTTCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGt            <  1:1054206‑M2/131‑1 (MQ=255)
                                                                                                                               ttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATGCCGTTTTACCTACCGt            >  1:913226‑M2/13‑143 (MQ=255)
                                                                                                                                tcgggaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGtt           <  2:1155418‑M2/132‑1 (MQ=255)
                                                                                                                                    gaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCa       <  1:650309‑M2/136‑1 (MQ=255)
                                                                                                                                       ggtaAGTGCAAAGATAATCGATGCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGtt    <  2:987305‑M2/139‑1 (MQ=255)
                                                                                                                                        gtaAGTGCAAAGATAATCGATTCTTTTGCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGttt   <  1:969620‑M2/140‑1 (MQ=255)
                                                                                                                                         taAGTGCGAAGATAATCGATTCTTTTTCGAGTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg  <  2:506298‑M2/141‑1 (MQ=255)
                                                                                                                                         taAGTGCAAGGTTAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg  <  2:582040‑M2/141‑1 (MQ=255)
                                                                                                                                         taAGTGCAAATACAATCGGTTCATTTTCGATTGTCGGGCTGTATGCGTCAACGTGAAACCGGTACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg  <  2:286216‑M2/141‑1 (MQ=255)
                                                                                                                                         taAGTGCAAAGATAGTCGATTCTTTTTCGAGTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg  <  1:157242‑M2/141‑1 (MQ=255)
                                                                                                                                         taAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg  <  1:720681‑M2/141‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                            
CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTG  >  NC_000913/258545‑258824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.