| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 88 (1.350) | 56/284 | 0.1 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 92 (1.420) | 52/284 | 0.2 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
TTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTA > NC_000913/2101609‑2101884 | ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaaggt > 2:137526/1‑142 (MQ=255)ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTATCTCTAGGAATTTTTGTTTTATTaagga > 2:137683/1‑143 (MQ=255)ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGCATCA‑GAATAGATACTTTCTTTAGGCATTTTTGTTTTATTaagga > 2:411637/1‑143 (MQ=255) cacaGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaaggaag < 1:337213/143‑1 (MQ=255) cacaGGACATAAAGTAACCTTGATCGAAGCCAGTTACACGCACAAAAGCTGAAAAACGGACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaaggaag < 1:729003/143‑1 (MQ=255) acaGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTCGGAATTTTTGTTTTGTTacggacag > 2:86975/1‑140 (MQ=255) caGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGt < 2:439968/143‑1 (MQ=255) aGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACGAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTg > 1:590953/1‑143 (MQ=255) aGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATCaaggagagtg > 2:70863/1‑138 (MQ=255) gTACATAAAGTACCCTTGTCCTTAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGc < 2:760438/143‑1 (MQ=255) aCATAACGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTGTAGGAATTTTTGTTTTATTAAGGAAGGTGCGa < 2:85631/143‑1 (MQ=255) cATAAGGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGaa < 1:406145/143‑1 (MQ=255) aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAACACGTAAGAGCATAGATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTGTTGTTTTATTAAGGAAAGTGCGAAt > 1:675620/1‑143 (MQ=255) aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAAt > 2:608900/1‑143 (MQ=255) aaGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAGTCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGGAGGTCCGAATAAg > 1:47656/1‑143 (MQ=255) aGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTCTCTTTAGGAATTTTTGTTATATTAAGGAAGGTGCGAATaaac > 1:940246/1‑141 (MQ=255) gTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCg < 1:169730/143‑1 (MQ=255) gTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCg < 1:844709/143‑1 (MQ=255) tAACCTTGATCAAGGCCAGTTACACGCACAAAATCTGAAAAACGTACCAGCATGAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCgg < 2:445657/143‑1 (MQ=255) aCCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTGTTATTAAGGAAGGTGCGAATAAGCgggg > 1:1090375/1‑143 (MQ=255) cTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGAGAATAATCGGGGat > 2:689497/1‑142 (MQ=255) tCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCGGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTGAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAAttct > 1:378401/1‑143 (MQ=255) cGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAAttctt < 1:608900/143‑1 (MQ=255) aaGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATtcttct > 1:397097/1‑143 (MQ=255) ccATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGACATTCGTCTCgg > 1:370323/1‑143 (MQ=255) ccATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCgg < 1:581975/143‑1 (MQ=255) cATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGc > 1:1020790/1‑143 (MQ=255) aTTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GCATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAACTTCTTCTCGGCt > 2:368954/1‑143 (MQ=255) aTTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt < 1:1068554/143‑1 (MQ=255) tttACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg > 1:71098/1‑143 (MQ=255) acGCACAACATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTCTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa < 2:589010/143‑1 (MQ=255) gCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGTAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGt > 2:565986/1‑143 (MQ=255) gCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGt > 1:360131/1‑143 (MQ=255) gCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACAGTAGCA‑GGATAGATACTTTCTTTAGGAATTTTTGTTTTATTACGGAAGGTGCGAATAAGCGGGGAAATTCTTCCAGGCTGCCTCAgg > 2:1147899/1‑142 (MQ=38) caAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGccat > 2:448112/1‑143 (MQ=255) gAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCatttcatttc > 1:325867/1‑143 (MQ=255) aaaaCGTACCAGCATAAATGATCCCGCCCACCCAACAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttctt < 1:315783/143‑1 (MQ=255) gtggaggaGCAGAAAGGATCCTGGGCACCAATCAACAGCCGT‑TCATGGAGATATACTGTCCTTAGGAAGTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt < 1:1113476/136‑1 (MQ=17) aCCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt < 2:1147641/143‑1 (MQ=255) aCCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt > 1:11174/1‑143 (MQ=255) cAGCATACATGATCCGGCGCAACAATCAACAAGCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGa < 2:777759/143‑1 (MQ=255) gCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc > 1:888358/1‑143 (MQ=255) aTGATCCTGCGCACCAAGCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATGAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt < 1:6177/143‑1 (MQ=255) gATCCTGAGCACCTATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttttt < 2:1102215/143‑1 (MQ=255) gtCCTGCGCACCAATCAACACCCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt < 2:505914/142‑1 (MQ=255) tCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc > 1:1042097/1‑143 (MQ=255) ccTGCGCACCACTCACCACCCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGTGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtct < 2:687814/143‑1 (MQ=255) ccTGCGCACCAATCAACACCCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtct < 1:145413/143‑1 (MQ=255) ccTGCGCAACAAGCAACGACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtct < 1:18490/143‑1 (MQ=255) cTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtctc < 1:1025396/143‑1 (MQ=255) tGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCAATTTTTTCTcc < 1:570570/143‑1 (MQ=255) cAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAAt < 1:876486/143‑1 (MQ=255) tCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTTTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGCGCCGATTTTTTCTCCTGttttagca > 2:124106/1‑136 (MQ=21) aacagcCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt < 1:814566/143‑1 (MQ=255) aacaacCGGATCA‑GAATAGATACTTTCTTTGGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGTAAATTGTTTTCGGCTGGCTCAGTTATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt < 1:576076/143‑1 (MQ=18) acaacCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTg > 1:1021193/1‑143 (MQ=255) caacCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTGTTAATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa < 1:1089942/143‑1 (MQ=255) aacCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCGTCACGGCTGGATCAGTAACTACTTTTCTTCATGTTTGAGCCGATTTTTTCTCCGTTAAATTCCtttca > 2:1143912/1‑140 (MQ=21) aacCGGATCA‑GAATAGATACTTTCTTTACCAAATTTTATTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa < 1:795641/143‑1 (MQ=17) gTATCA‑TAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCTAATAAGCGGTGAAATTCTTCTCGGCCGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg < 1:351257/143‑1 (MQ=255) aTAGATACTTTCTTTAGGAATTTTTGTGTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa < 2:793932/143‑1 (MQ=255) aggttcttgctttAGCACTTTTTGTTTTATTACGGTAGGAGCGAATAAGCGTGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGa < 1:977106/138‑1 (MQ=14) ctttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGtt > 2:1160062/1‑143 (MQ=255) tttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt < 1:324415/143‑1 (MQ=255) ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTAAACCGATTACGTTCGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGCttc > 1:857956/1‑143 (MQ=17) tttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc < 2:687485/143‑1 (MQ=255) tttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc < 2:325867/143‑1 (MQ=255) tttAGGAATTTTTGTTTTATTAACGAAGGTGCGTATAAGCGGGGAAATTCTTCTCTGCTGACTCAGTCATTTCATGTCTTCATGTTTGAGCCTATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc < 2:1011197/143‑1 (MQ=14) ttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATTTTTGAGCCGATTTTTCCTCCCGTATTTTCCTTGTATCTTCCTTTTTAGTCTGTttcttcc > 2:1100905/1‑142 (MQ=14) tgaGGAATCTTTGTTTTATGAAGGAAGGTGCGAAGAAGCGGGGAAATTCTTCTCGGCTGACTCAGGCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTGGAATCAGCCTATTTAGACCGTTTCTTCg < 1:281045/141‑1 (MQ=14) aGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTTAATCCGCCTATTTAGACCGCTTCTTCGcc > 2:1165530/1‑143 (MQ=255) aGGAATTTTTGTTGTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTGCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc < 1:86975/143‑1 (MQ=255) ggAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGCATCCGCCTATTTAGACCGTGTCTTCGccg > 2:1106517/1‑142 (MQ=255) gAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAt > 2:314747/1‑143 (MQ=255) tttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg < 2:1042097/143‑1 (MQ=38) tttGTTTTATCAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg < 1:168404/143‑1 (MQ=25) tttGTGTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACGCAGTCATTTCATTTCTTCATGGTTGAGCCGATTTTTTCTCCCGTGAATTCCTTGAATCAGCCTATTGAGACCGTTTCGTCGCCATTTacg > 1:798380/1‑141 (MQ=11) tgtgTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGCTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGc < 2:1037627/143‑1 (MQ=18) ttattaAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTa > 1:956217/1‑143 (MQ=32) | TTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCA‑GAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTA > NC_000913/2101609‑2101884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |