Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 41 [0] [0] 41 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)41 (0.630) 33/284 1.3 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  >  NC_000913/4001511‑4001787
                                                                                                                                           |                                                                                                                                         
atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc                                                                                                                                        <  1:735324‑M2/4‑1 (MQ=255)
atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc                                                                                                                                        <  1:651676‑M2/4‑1 (MQ=255)
  ggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCctt                                                                                                                                      <  1:749589‑M2/6‑1 (MQ=255)
    attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttct                                                                                                                                    >  1:949571‑M2/136‑143 (MQ=255)
          ctcgtcgagccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttct                                                                                                                              <  2:916818‑M2/14‑1 (MQ=255)
           ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggcactggcagacatcgaagcatcggcccgtttctttgaagacgccgcaggcctgcatCTCcttcttcttctt                                                                                                                             >  1:427089‑M2/129‑143 (MQ=255)
             gctgaacctgacgaggaggggcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg                                                                                                                           <  2:379541‑M2/17‑1 (MQ=255)
                gaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcccgtttctttgacgacgacgccggcctgcatCCTCTTCTTCTCCATTCAAg                                                                                                                        >  1:135916‑M2/124‑143 (MQ=255)
                        cgaggacgcgcgactgcgcgtacaatctgaacttggccagagcctggcaacctgcctgcaacttgaagacatcgaagcatcggcacgtttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa                                                                                                                <  2:1018795‑M2/28‑1 (MQ=255)
                          atcacgggcgactgcgtgtacaatctgaacttggccagagcctggcacccccccctgaactggaagacatcgaagcatcgccacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGa                                                                                                              <  2:191662‑M2/30‑1 (MQ=255)
                               gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACg                                                                                                         >  2:937915‑M2/109‑143 (MQ=255)
                                 gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc                                                                                                       >  2:913408‑M2/107‑143 (MQ=255)
                                                atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg                                                                                        <  1:584878‑M2/52‑1 (MQ=255)
                                                 tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTgg                                                                                       >  1:248416‑M2/91‑143 (MQ=255)
                                                 tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggaacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTACACTGTgg                                                                                       >  1:10‑M2/91‑143 (MQ=255)
                                                       cttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTACCTCCACTGTGGCATTTa                                                                                 <  1:941390‑M2/59‑1 (MQ=255)
                                                       ctgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa                                                                                 <  2:221257‑M2/59‑1 (MQ=255)
                                                       cgtggccagagcctggcaacccgccgggaacgggaagacatcgaagcatcggcacgttgctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa                                                                                 <  2:982218‑M2/59‑1 (MQ=255)
                                                        ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGCTGCGGAAGCTCACCCCGGTCACTCCACTGCGGCATTTAc                                                                                >  2:268770‑M2/84‑143 (MQ=255)
                                                          ggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTtacaa                                                                              >  1:799335‑M2/82‑141 (MQ=255)
                                                                agcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAGGATCACGCCGGTCACTCCCCTGCGGCACTTCCCATCCGTg                                                                        >  2:740449‑M2/76‑143 (MQ=255)
                                                                agcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttatttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTg                                                                        >  1:602619‑M2/76‑143 (MQ=255)
                                                                 gcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgcagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa                                                                       <  1:141293‑M2/69‑1 (MQ=255)
                                                                 gcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa                                                                       <  1:1133527‑M2/69‑1 (MQ=255)
                                                                    tggccacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcagCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATgg                                                                    <  2:1002048‑M2/72‑1 (MQ=255)
                                                                      gcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcatgcatCTACTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCAGTGatgggc                                                                  >  1:174950‑M2/70‑141 (MQ=255)
                                                                        aacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcgt                                                                <  1:671817‑M2/76‑1 (MQ=255)
                                                                           ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGAAGATCGCGCCGGTAACTCCACACTGTCTGTTTTTATCCGTGCTGGTCGTCTg                                                             >  1:733149‑M2/65‑143 (MQ=255)
                                                                             gcccggaactggaagacatcgcagcttcggcacgtttctgtgaagaccacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt                                                           <  2:1082697‑M2/81‑1 (MQ=255)
                                                                             gcccggaactggaagacatcgaagcatcggcgcgtgtctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt                                                           <  1:911768‑M2/81‑1 (MQ=255)
                                                                                         aggacatggaagcatcggtacttttcttttaagactacgacggcctgcatCTCTTTCTTCTTCTTTGAAGATGCGGAAGATCACTCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga                                               <  2:976473‑M2/93‑1 (MQ=255)
                                                                                                cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAAATTCACTGTGGCATTTCCCATCCGTGATCGTCGTGTGTTTACTcggcgtgagcgtgcg                                        >  2:234695‑M2/44‑141 (MQ=255)
                                                                                                     catcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGcc                                   >  1:113412‑M2/39‑143 (MQ=255)
                                                                                                           cccgtttctgtgaatacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCttt                             <  1:1040392‑M2/111‑1 (MQ=255)
                                                                                                              gtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCg                          <  1:148832‑M2/114‑1 (MQ=255)
                                                                                                               tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTcgg                         >  1:1158215‑M2/29‑142 (MQ=255)
                                                                                                                ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATTCGTGATGGTCGTCTGATTACTCTGCGTGAGCGTGAACTCCCCGCCTTTCGTc                        >  2:316654‑M2/28‑143 (MQ=255)
                                                                                                                 tctttgaagactacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt                       <  2:602619‑M2/117‑1 (MQ=255)
                                                                                                                     tgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAt                   >  1:566362‑M2/23‑143 (MQ=255)
                                                                                                                            gccgacggcctgcatCGCCTTCTTCTTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGACCTGCCCGCTTTTCGTCTGTATCGTATGc            <  1:1153284‑M2/128‑1 (MQ=255)
                                                                                                                                      tgcttCTCCTTCTTCTGCTGTGAAGATGCGGAAGTTCACGCCGGTTTTTCCACTGTGGCATTTACCATCCGGGATGGTCGTCTGTTTACTCTGCGTGCGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAg  <  2:758014‑M2/138‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                         
TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  >  NC_000913/4001511‑4001787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.