New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 404068378 (1.200)14 (0.220) 4/280 9.5 14.8% intergenic (+47/+223) rrfA/mobB 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
?NC_000913 = 4213162 84 (1.310)intergenic (+3/‑72) rrfE/yjaA 5S ribosomal RNA of rrnE operon/stress‑induced protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGT  >  NC_000913/4213027‑4213304
                                                                                                                                       |                                                                                                                                               
aTAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAACCGCCGTAGCGCCGATGGGAGTGTGGGGTCTCCACACGCGAGAGTAGGGAACTGCCAGGCATCACATTAgga                                                                                                                                          >  2:153436/1‑141 (MQ=11)
   aaaCAGAACTTGCCGGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACCCAGAAGTGAAGCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaaaa                                                                                                                                       <  2:636007/143‑1 (MQ=255)
       agcatgggCCTGGCGGCGGTAGCGCGGTCGGCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGACGGTAGTGTGGGGTCTCCCCACGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAcccc                                                                                                                                   <  2:801919/136‑1 (MQ=11)
           tttGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGGCCCTATGCCGAACTCAGAAGTGAAACGCCGTAGCGGCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTc                                                                                                                               <  1:275028/143‑1 (MQ=255)
            ttGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTcc                                                                                                                              >  1:697062/1‑143 (MQ=255)
              gCCTGGCGGCAGGAGCGCGGTGCGCCCACCTGGCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCTATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCAt                                                                                                                            <  1:491545/143‑1 (MQ=14)
                cTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCGGAACTCAGAAGTGAAACGCCGGAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATaa                                                                                                                          <  1:422699/143‑1 (MQ=255)
                cTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATaa                                                                                                                          >  1:53195/1‑143 (MQ=255)
                 tGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAg                                                                                                                         <  1:950251/143‑1 (MQ=255)
                   gcggcAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGc                                                                                                                      >  1:839894/1‑143 (MQ=255)
                       cAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCggg                                                                                                                  <  1:473198/143‑1 (MQ=255)
                          ttgcgcGGCGGTCCCACCTGCCCCGATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGCGGGGTCTGCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATCAGAAAAACCCCGGTCCATAAGGCCGGGGtt                                                                                                               <  2:250639/141‑1 (MQ=17)
                             gggggtggtCCCACCTGACCCCGGGCCGAACTCAGAAGTGAAAGGCCGTAGCGCCGATGGGAGTGGGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGttttt                                                                                                            <  2:770489/140‑1 (MQ=17)
                              gcgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAACCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGtttttt                                                                                                           <  1:673664/143‑1 (MQ=255)
                              gcgGGGGTCCCACCTGACCCCAGGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGtttttt                                                                                                           <  2:383429/143‑1 (MQ=255)
                               cgGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACGCCGGTCCATAAGGCCGGGGTTTTTTg                                                                                                          >  2:748639/1‑143 (MQ=255)
                                 gtggtCCCACCTGCCCCCAGACCGGACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGCCTTATGGACCGGGGtttttctaa                                                                                                        <  2:394640/143‑5 (MQ=14)
                                   ggtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGCTTTGTCCata                                                                                                      >  2:18223/1‑143 (MQ=255)
                                    gtCCCACCTGACCCCATGCCGAACTCAGAAGCGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACGCCGGTCCATAAGGCCGGGGTTTTTTGCatat                                                                                                     >  1:50443/1‑143 (MQ=255)
                                     acccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATc                                                                                                    <  1:686730/142‑1 (MQ=255)
                                      cccACCTGGCGCCACGCCGCACTCAGAAGGGAGACGCCGTAGGGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCa                                                                                                   <  2:889623/143‑1 (MQ=18)
                                       ccACCTGCCCCCATGCCGAACTCAGAAGTCAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCaa                                                                                                  <  1:89162/143‑1 (MQ=255)
                                       ccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTAGCATATCaa                                                                                                  >  2:1070653/1‑143 (MQ=255)
                                         aCCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAatt                                                                                                >  1:599600/1‑143 (MQ=255)
                                           cTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACCGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGATTTTAGCATATCacatat                                                                                              >  1:1025565/1‑138 (MQ=255)
                                            tGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAattatt                                                                                             >  1:1104547/1‑143 (MQ=255)
                                                cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGCGGTCTCCCCATGCGAGACTAGGGAACCGCCCGGCATCAAACTAGACAAACCCCGCTCCCCAAGCCCGGCGCCTTTTGCATACCAATTATTCGCa                                                                                         >  2:1057333/1‑143 (MQ=14)
                                                 ccATGCCGAACTCAGAAGGGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCat                                                                                        <  1:804642/143‑1 (MQ=255)
                                                    tGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGGGTGGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATAAATTATTTGCatgat                                                                                     >  1:1140921/1‑143 (MQ=255)
                                                      ccGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGAACCGTAGAAGAAAACCCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAAGTATTTGCAtgatga                                                                                   >  1:734858/1‑143 (MQ=18)
                                                        ggacgcAGAAGTGAGACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAg                                                                                 <  2:609973/138‑1 (MQ=255)
                                                         aaCTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTACAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCCCGATGAAgg                                                                                >  2:581015/1‑143 (MQ=255)
                                                            tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTCTTTGCGTGATGAAGGGaa                                                                             >  1:124459/1‑143 (MQ=255)
                                                            tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTCTTGCATATCAATTATTTGCATGATGAAGGGaa                                                                             >  1:526435/1‑143 (MQ=255)
                                                             cAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAt                                                                            <  1:313684/143‑1 (MQ=255)
                                                              aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCCGGCATCAACTTAGCATTACCCCGGTCCATAAGGACGGAGAATTATACATATAAATTATTTAAAAGATGAAggacatc                                                                           >  1:5292/1‑138 (MQ=14)
                                                              aGAAGGGAGATGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGATCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAtc                                                                           <  2:577323/143‑1 (MQ=255)
                                                                aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGTTGTATTCCCATGCGAGAGTAGTGATTTGCCAGGCATCAAATTAGAAAAACCCCGGGCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAtctc                                                                         <  1:631816/143‑1 (MQ=25)
                                                                aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAtctc                                                                         >  1:364209/1‑143 (MQ=255)
                                                                aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCAGGAGCGAAGAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCACTAAGCCCGGGGGTTATCACATATCAATTAATCGCATGCTCAAGGGaaacgc                                                                         >  2:191043/1‑139 (MQ=17)
                                                                  gggAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                       <  1:701204/141‑1 (MQ=255)
                                                                  gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                                                                       <  1:283188/143‑1 (MQ=255)
                                                                   ttgaaCGCCGGAGCGCCGATGGGCGTGTGGTGTCTCCCCATGCGAGAGTACGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATg                                                                      <  2:790087/140‑1 (MQ=37)
                                                                     aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGCAAAACCCCGGTCCATAAGGCCCGGACTTTTTGCACATCAATTATTTGCATCATGGAGGGCAtctaacggc                                                                    >  2:1130457/1‑137 (MQ=18)
                                                                       aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAAGCATCAACTTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATGTCAATTATTTGCATGATGAAGGGAATCCCATGTCAg                                                                  >  1:108002/1‑143 (MQ=255)
                                                                          ccGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGCGTAGGGAACTGCCAGGCATCAAGTTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCACGTCAGTTc                                                               >  2:296043/1‑143 (MQ=255)
                                                                             tAGCGCCGGCGGAAGGGGGCGGCCTCCCCAGGCGAGGGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGt                                                            <  2:741477/143‑1 (MQ=38)
                                                                             tAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAGTTATTTGCATGATGAAGGGAATCTCGTGTCGGTTCTGt                                                            >  1:824088/1‑143 (MQ=255)
                                                                                cgcCGATGGTAGTGTGGGGTCTCGCCATGCGAGAGTCGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGtata                                                         <  2:632786/143‑1 (MQ=255)
                                                                                 ggcGATGGTAGTGTGGGGTGGCCGCAGGAGAGAGTGGGGAACTGCCATGCATCAAATTAGAAAAACCCCGGTCCATAATGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTatat                                                        <  2:518077/141‑1 (MQ=255)
                                                                                    gATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGACGGGAATCTCATGTCAGTACTGTATATCCa                                                     >  2:5946/1‑143 (MQ=255)
                                                                                          aGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtcg                                               >  1:1098965/1‑143 (MQ=255)
                                                                                             gtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATAAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTACAGTATATCCACAGtcgcag                                            >  2:976783/1‑140 (MQ=38)
                                                                                              gggggTATCAACATGCGAGAATGGGGAACTGGGAGGCATTAAATTAGAAAAACCCTGGTGCATAAGGCAGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTcgtcgt                                           <  2:80061/142‑1 (MQ=255)
                                                                                                  gTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATc                                       >  2:798445/1‑143 (MQ=255)
                                                                                                     tcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCCGTGCTGTATATCCACATTCGTCGTAATCaaa                                    >  2:1020714/1‑143 (MQ=255)
                                                                                                     tcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTATATATCCAAATTCGTCGTAATCaaa                                    >  1:918859/1‑143 (MQ=255)
                                                                                                       cccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAAtt                                  >  1:221902/1‑143 (MQ=255)
                                                                                                              gagaGGAGCGAACTGCCAGGCATCAAATTAGCAAACCCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTc                           <  2:475425/143‑1 (MQ=255)
                                                                                                               agagTAGGGAACTGCCAGGCATCAAATTAGAAACACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTcg                          <  2:467131/143‑1 (MQ=255)
                                                                                                               agagTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGCCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGCTcg                          >  2:231719/1‑143 (MQ=255)
                                                                                                                cggTAGGGATCTGCCATGCATCAAATTCGAAAACTTCCTGTCTATGAGGCCGGGGTTTTTTGCATATCAATTATTTGCATTATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTcgc                         <  2:71903/141‑1 (MQ=255)
                                                                                                                     gggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCt                    >  1:671119/1‑143 (MQ=255)
                                                                                                                     gggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATACGTACTTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCt                    >  2:1086727/1‑143 (MQ=255)
                                                                                                                     gggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGGTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTCCTGTTCGCGACCt                    >  1:392430/1‑143 (MQ=255)
                                                                                                                     gggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGATTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCt                    >  1:556238/1‑143 (MQ=255)
                                                                                                                      ggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCtt                   >  1:439523/1‑143 (MQ=255)
                                                                                                                       gAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCCGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTg                  <  1:374122/143‑1 (MQ=255)
                                                                                                                        gaCTGCCAGGGATCAAATGCGAAAAACCCCGGTCCATAAGGCGGGGGTTTTTTGCATATCAATTGTTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGa                 <  2:272945/142‑1 (MQ=255)
                                                                                                                        aaCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAAATACTGTTCGCGATCTTGa                 >  1:787425/1‑143 (MQ=255)
                                                                                                                         aCTGCCTGGCTTCTAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGaa                <  2:697062/143‑1 (MQ=255)
                                                                                                                         aCTGCCAGGCATCAAATTAGAAAAGCCCCGGTCCATAAGGCCGGTGTTTGTTTCATATCTATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGaa                <  2:1080396/143‑1 (MQ=255)
                                                                                                                         aCTGCCAGGCATCAAATTAGAAAAACCTCGGTCCATAAGGCCGGGGGTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGGAATCAAATTACTGTTCGCGATCTTGaa                <  2:1027621/143‑1 (MQ=255)
                                                                                                                           tGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAGATTACTGTTCGCGATCTTGACAg              >  1:360196/1‑143 (MQ=255)
                                                                                                                                  cATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGt       >  2:859767/1‑143 (MQ=255)
                                                                                                                                   aTCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGATCGCGATCGTGAAAGCGAACGTg      >  1:95821/1‑143 (MQ=255)
                                                                                                                                    tCAACTTAGAAAAACCTCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGa     <  2:53195/143‑1 (MQ=255)
                                                                                                                                    tCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGa     >  1:813802/1‑143 (MQ=255)
                                                                                                                                     cAAATTAGAAAACCCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGaa    <  1:138010/143‑1 (MQ=255)
                                                                                                                                     cAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTTATTTATGTATTTCAAAAGCCTGCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGaa    >  2:833294/1‑143 (MQ=255)
                                                                                                                                      aaaTTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGAGAAg   >  1:971579/1‑143 (MQ=255)
                                                                                                                                      aaaTTAGAAAAACCCCGGTACATAAGGCGAGGGTTTTGTGCATTTTTTTTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAg   >  1:551114/1‑143 (MQ=255)
                                                                                                                                       aaTTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAgt  >  1:341151/1‑143 (MQ=255)
                                                                                                                                       aaTTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAgt  <  1:18223/143‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                               
ATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGT  >  NC_000913/4213027‑4213304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.