| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,060 | 0 | C | T | 29.3% | 83.6 / 52.7 | 83 | intergenic (+266/+376) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base C (37/21); new base T (14/10); total (52/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGT > NC_000913/4295922‑4296196 | gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGCCATCAATGCCt > 1:829021/1‑143 (MQ=17)gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCCATGCCt > 1:761769/1‑143 (MQ=17) gtgtctGCCGCTTGCGGCGTGAACGCCTGATGCGACGCGTGACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTATCCCTTATAACGCGTTTACGCCGCATCCGACATCAACGCCTGa < 2:525588/138‑1 (MQ=11) gTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGGGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa > 2:176349/1‑143 (MQ=17) tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAGTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTCTACGCCGCATCCGACACCAACGCCTGAt > 2:926768/1‑143 (MQ=12) tacgCCGCATCCTCCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTCCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGc < 1:1112598/140‑1 (MQ=255) tacgCCGCACCCCACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGc < 1:1133339/140‑1 (MQ=255) aTGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAATGCGTTTACGCCGCATCCGACATCAATGCCTGATGCg > 2:983288/1‑143 (MQ=17) cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGGTTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCTACGc > 1:916564/1‑143 (MQ=12) cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGcgccgc > 1:1044894/1‑143 (MQ=17) gCATCCGACATCAACCCCTGATGCGACGCTTAGCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCt < 1:304861/143‑1 (MQ=17) aTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACCTCAATGCCTGATGCGACGCTTg > 2:856592/1‑143 (MQ=12) aTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTg > 1:436194/1‑143 (MQ=33) cgcGACATCCACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCTCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGc < 2:579022/141‑1 (MQ=19) ccGGCATCAACGCCGGATGCGACGCTTAACGCGTCTTATCAGGCCGACGCCAGACAGCGCAAGAGCCTGATTTGGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGcc < 1:858092/143‑1 (MQ=11) gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgc > 1:930749/1‑143 (MQ=25) aTCACCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc < 1:173137/143‑1 (MQ=255) tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACCTCAAAACCTGATGCGACGCTTTCcgcgccc > 2:802075/1‑140 (MQ=11) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTCGGTCGGATACGGCGTTTACGCCGCATCCGACATCAATGCCAGAAGCGACGCTTGCCGCctctca > 1:125680/1‑141 (MQ=11) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa > 1:828054/1‑143 (MQ=25) aCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGCCTTAt > 2:414920/1‑143 (MQ=21) cTGATGCGACTCTTACCGCGTCTTATCACGTCTACGCCAGACAGCACAATAGCCTGATTTAGCGTGATTTTGGAAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 2:912184/143‑1 (MQ=14) cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 1:11244/143‑1 (MQ=21) cTGAGGCGACGCTTAGCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg < 1:279450/143‑1 (MQ=255) tGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTCCCGCGGCTTATCAGGc > 1:902140/1‑143 (MQ=255) gCGACGCTTAACGCGGCGTATCAGGCCTACGCGCGACAGCGCAATAGCCGGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc < 1:730472/143‑1 (MQ=11) cGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatc > 1:136095/1‑141 (MQ=17) gACGCTTAACGCGTCTGATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGc < 1:380434/143‑1 (MQ=255) aCGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGcc > 1:966900/1‑143 (MQ=39) cGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCa < 1:869431/143‑1 (MQ=38) aCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACCCTAGACGgc > 2:389383/1‑143 (MQ=255) cgcggattATCAGGCGTAGGGCAGAGAGGGAGATGGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAGGGAGTGTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAgcg < 2:194546/137‑1 (MQ=11) cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCt < 1:985139/97‑1 (MQ=34) cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg > 1:552290/1‑124 (MQ=39) tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAg < 1:402785/122‑1 (MQ=25) tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAg > 2:402785/1‑122 (MQ=38) cTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCTTTTACGCCGCATTCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa < 1:346016/143‑1 (MQ=255) cTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTCCCCCAGACGgcgctaca > 2:12576/1‑139 (MQ=255) cTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa < 1:527788/143‑1 (MQ=39) tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGa < 1:935875/99‑1 (MQ=21) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGcc < 2:235503/106‑1 (MQ=25) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGcc > 1:235503/1‑106 (MQ=38) aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc < 1:1054119/86‑1 (MQ=25) aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc > 2:1054119/1‑86 (MQ=18) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCCGCCTGCGCTACAGCCTgct > 1:964084/1‑141 (MQ=11) ccTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa < 2:772984/87‑1 (MQ=25) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCCGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc < 1:1067218/143‑1 (MQ=38) ccAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCCGGCCTCCGCCACACGCCGCAATAGACTGCCTTAGcccc > 2:642970/1‑140 (MQ=11) aGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTg > 1:685402/1‑143 (MQ=17) cgcAACAGCCCGAGTCACCGTGGTTTT‑GTAGGTCGGGTAAGGCGTTTACGCCGCATCCGGCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTa < 2:342669/143‑1 (MQ=11) aTAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTc < 1:951088/143‑1 (MQ=39) ccTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAg < 2:332102/123‑1 (MQ=17) tGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACATCGGAATAGCCTGCTATAGCGTGACTCTGTGGGTCGGacca > 2:609256/1‑140 (MQ=14) tttAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTc < 1:328543/78‑1 (MQ=255) tttAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc > 2:328543/1‑78 (MQ=255) cGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACCTCAGCCGGTGCTGTAGCCTGGTTCGGAGTGGCTTTGTAGAGCGAAAGAGGCGTTTa > 2:978996/1‑143 (MQ=14) aTTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCGGGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTGATTTTGTAGGTCGGATCACGCGTTTCTGcc > 1:1114883/1‑143 (MQ=11) ttt‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGa < 2:245376/49‑1 (MQ=255) ttt‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGa > 1:245376/1‑49 (MQ=38) tt‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTCCGCCAGACAGCGCAATAGCCTGATCTAGCGTGAGTTTGTAGGTCCGTTCAGGCGTTTATGCCGcg > 1:1143643/1‑142 (MQ=14) tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGACTTTGTAGGTCGGATAAGGCGTTGATGCCGCCTcc > 1:926846/1‑143 (MQ=255) ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCATTAGCCTGTTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGa > 1:288844/1‑143 (MQ=255) gATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACCCCAGACAGCGCAATAGCCTGCTTTCGCGTGATTTCCTCGATCGGACAAGGCGTTTCTGCCGCATCCGACACCa > 2:169685/1‑143 (MQ=14) aTAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTATCGTGATTTTCTACATCGGATAAGGCGTTTATGCCTCCTCCGACACCaa > 2:298797/1‑143 (MQ=14) tAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCGTATCAGGCCTACGCTAGACAGCGCAATAGCCTGAATACGCGTGATATTGGAGGTCAGATCATGCGTTCATGCGGCGTCAGACATCacg > 2:656120/1‑141 (MQ=11) ggCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGACTGCTTTAGCGTGACTTTGTAGGTCGGATAAGGCGTTGCGGCCGCATGCGAGATCAATGcc > 2:294780/1‑143 (MQ=14) ggCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTCGTAGGTCGGACAAGGCGTTTATGCCGCATCCGACATCAAcccc > 2:435454/1‑143 (MQ=255) gCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCACCGCCt > 1:217489/1‑143 (MQ=38) cGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTg > 1:955026/1‑143 (MQ=39) ttACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAACGTAATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATg > 1:788229/1‑143 (MQ=255) ccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACg > 1:196656/1‑143 (MQ=35) cgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc > 1:1056300/1‑81 (MQ=40) gcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCt > 1:1053294/1‑143 (MQ=25) gccGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTaa < 2:1040672/142‑1 (MQ=25) cccagaTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGCCATCAACGCCTGATGCGACGCTTAAc < 1:644601/138‑1 (MQ=19) cGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATa > 2:693614/1‑63 (MQ=255) cGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCAGCCGCCGTCAGCGCCTGCTGCGACGCTTGAcg > 1:584846/1‑143 (MQ=11) cGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTCACGCCGCCTCCGACCTCCACGCCAGACGAGACGCATACcg > 2:328741/1‑143 (MQ=11) gACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGGGACGCtcgccgc > 2:930392/1‑137 (MQ=11) gACATCAACGCCTGATGCGACGATTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTCGGTAGGATAAGGCGTTTATGCCGCCGCGGAAATCGACGACTGTTGCGACGTTTGAcgg > 2:334664/1‑142 (MQ=11) tgtCATCGCCGGTTGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCCGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGt < 2:1060993/141‑1 (MQ=255) aTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGtt > 1:233556/1‑98 (MQ=37) aCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACAt > 2:877663/1‑111 (MQ=31) | GCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTT‑GTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGT > NC_000913/4295922‑4296196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |