| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,951,735 | Δ326 bp | pseudogene (194‑519/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3951735 | 3952060 | 326 | 45 [0] | [1] 45 | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3951734 | 0 (0.000) | 42 (0.690) | 37/268 | 0.8 | 100% | pseudogene (193/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| ? | NC_000913 | 3952061 = | 0 (0.000) | pseudogene (520/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted | |||||
TACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3951590‑3951734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggaaaGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGTAATTCAGAAATGTTGGAGAAATTATC > NC_000913/3952061‑3952200 TACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGGTGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACCCTCCCCCGGA > 2:422982/1‑143TACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGA < 2:487708/143‑1 cgcgcgTCCCGGTGACGCTAGCTGCGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAA < 2:9572/137‑1 ATCCCGGTGACGCTATCTACGCGCCGTCGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCA < 1:670823/143‑1 TCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAG < 1:196722/143‑1 GGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGGAAGACCGGGTTG > 1:651964/1‑143 GACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGAGCGTAAACCTGCGGATTGCGGCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAG < 2:1119247/143‑1 CGCTATCTACGCGCCGCTGTTGTTAAGCCAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACGACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCG < 2:1113766/143‑1 TCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGCAAGACCAGGTTGAAGCGGCACT > 1:1045329/1‑143 CGCGCCGTTGTTGTGAAAACAACTGTCGGATCGTGAAACTTCGTATGGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGAC < 2:1126647/143‑1 GCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGCCGCGGCCCTCGACCCC > 1:916779/1‑143 CGTTGGTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCAT < 1:462215/143‑1 GTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGCGCCGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCAGAAAGACCAGGTTGAAGCGGCACTGCACAACATGCTG > 1:5064/1‑143 TTAAGACAGCTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCGCACTCGCCCGGAAAGAGCGGGTTGAAGCTGCACTCGACACCATGCTGAACA < 2:143091/143‑1 TTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACA > 2:515960/1‑143 TTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTCGAAGCGGCACTCGACACCATGCTGACCA > 2:364408/1‑143 TTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGATGAAGCGGCACTCGACACCAGGCTGAACA > 2:678638/1‑143 AACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGG < 1:691240/143‑1 AACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGAACCCATGCTGAACAGCGAGGG > 2:855606/1‑143 cgGTCGGACCCTCAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGGGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGC < 1:35134/141‑1 CTGTCGGATCGTACACCTGCGGCGTGCGTCGTGACCACGGATGCGGGGCAGCACTATATGTGCGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGC < 2:668048/143‑1 GTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGGTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCA > 1:1084237/1‑143 TCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACCTCGCCCACACTCGCCCGGACAGACCCGGTTGAAGCGGCACTCGACGCCATGCTGAACAGTGATGCGCCAT > 1:729654/1‑143 CGTAAACCTGCGGATTGCGTCGAGCCGACAGAGGTGGGACCTGACCATATTCGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGC < 1:843183/143‑1 GTAAACCGCCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCT < 1:407068/143‑1 TAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTT > 1:202144/1‑143 AAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTC < 1:450469/143‑1 AAACCTGCGGAGTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTC < 1:930878/143‑1 CTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGGACAGTGATGGGCCATACCTGCTGCATGT > 1:208296/1‑143 gtgGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAAT < 2:794296/140‑1 GTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACG > 1:651850/1‑143 ACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATCCCTGCTTCATGTCTCAATCGACGACCTTG > 1:355180/1‑143 gCACAGCTGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGAGCAGGTTGAAGCGGAAATCGTCAGCATGCTGAACAGTGATGGGCAATACCTGCTTCATGTCTCAATCGACGAACTTGA < 2:247137/142‑1 AGATGTGGGGCAGCACGAGGTGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAATCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAAC < 2:928809/143‑1 GTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCT > 1:1004260/1‑143 GGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGG < 1:565813/143‑1 GGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGC < 1:1142227/143‑1 GGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACAAGGTTGAAGCGGCACGCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCCATCGACGAACTTGAGTACGTCTGGCC > 1:22149/1‑143 GCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTG < 1:192270/143‑1 CAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACACTGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCCGGTGC > 2:76987/1‑143 GGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGCAGCGGCACGCGACACCATGCTGCACAGTGATGGGCCATACCTGCTCCATGTCTCAATCGACGCACTCGAGAACGTCTGGCCGCTGCTGCCGCgtcg > 2:237988/1‑139 GGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACCGCGATGGGCCATACCTGCTTCATGTCCCAATCGACGAACCTGAGCACGTCTGGCCGCTCGTGCCGCCCGGC > 2:424831/1‑143 GGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGCGATGCGCCATACCTGCTTCATGTCTCAATCGACGAACTCGAGAACGTCCGGCCGCTCGTGCCcgccggc > 2:35823/1‑136 GCAGCACATCGCCCACACTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACCGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGGACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGT > 1:128305/1‑143 ACATCGCCCACCCTCGCCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGTAATTC < 1:948593/143‑1 AAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGTAATTCAGAAATGTTGGAGAAATTATC < 1:515960/143‑1 AAAGACCAGGTTGAACCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCTGCTGGTGCCGCCTGGCGCCAGTAATTCAGAAATGTTGGAGAAATTATC < 1:687640/143‑1 TACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3951590‑3951734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggaaaGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGTAATTCAGAAATGTTGGAGAAATTATC > NC_000913/3952061‑3952200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |