New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 193453 | 66 (1.020) | 3 (0.050) | 3/264 | 9.6 | 4.9% | intergenic (+24/‑68) | frr/dxr | ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase |
? | NC_000913 | = 193478 | 55 (0.910) | intergenic (+49/‑43) | frr/dxr | ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGC > NC_000913/193339‑193617 | tcAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTggcg < 1:329756/143‑1 (MQ=255) gACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGGTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGgcggcga > 2:582535/1‑142 (MQ=255) gacggaCAGAGACTGGCGGATGCTGCAATCGAGAAGATTGGAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGtttt < 2:1096312/138‑1 (MQ=255) gATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAGAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGgttt > 1:600094/1‑143 (MQ=255) gATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGtttt > 1:851114/1‑143 (MQ=255) aTGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGCTGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGgcggcgagttg > 1:333523/1‑138 (MQ=255) aCAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCttt < 2:977032/143‑1 (MQ=255) cAGAAAGTGACCTATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCtttt < 1:152238/143‑1 (MQ=255) cAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCtttt < 1:617726/143‑1 (MQ=255) tgatggaTGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTg < 1:871516/138‑1 (MQ=255) acggaTGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGtc < 1:396352/140‑1 (MQ=255) tgaTGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGtctc > 1:567630/1‑143 (MQ=255) tgctgcAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAAc < 1:400164/143‑1 (MQ=255) tgcAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAActct < 1:977716/143‑1 (MQ=255) cAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTgg < 1:596767/143‑1 (MQ=255) aaTCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGa > 1:1111631/1‑143 (MQ=255) aTCAAGAAAATTGAAGCGGTGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCCACTCTggcg > 2:384312/1‑141 (MQ=255) cAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGt < 1:156410/143‑1 (MQ=255) cAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATCTCTGTAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGt < 1:849546/143‑1 (MQ=255) aaGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTCATGCCGAAGTGTTTTCTTTAACGACAAAAACGCCGCTCAGTAGATCCTTAAGTAGCA‑GTCGGCGGCGCTCTGCTCTCTACTCTGTCTCGACTCCGGGTggt > 2:461593/1‑141 (MQ=255) gacagtGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGAGGCAGTTCTGATTGCTTGAACGACAAAATCGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGGCTCAACTCTGGATGTTTCa < 1:558141/138‑1 (MQ=255) aaaaTTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCa < 1:558133/143‑1 (MQ=255) aaaaTTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCa < 1:558149/143‑1 (MQ=255) aaaaTTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCa < 1:558140/143‑1 (MQ=255) aaTTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATg > 1:770003/1‑143 (MQ=255) tGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCGCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAg < 1:412461/143‑1 (MQ=255) cggcgCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACt > 2:444562/1‑143 (MQ=255) aGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGAAACG‑GGTTGCGGCGTTTTGCCATTTATTCTGTCTCAACTCTGGATGTTTCATGAGGCAACTCACCATTCTg > 1:794169/1‑143 (MQ=255) gACAAAGAAGTAGACCTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTgg < 2:917445/143‑1 (MQ=255) gACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTgg < 1:86698/143‑1 (MQ=255) gCAGAACTGATGAAGTGCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCg < 2:647662/143‑1 (MQ=255) gAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCt < 1:160416/143‑1 (MQ=255) gATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGAtt < 2:816831/143‑1 (MQ=255) gATGCAGTTCTGATGTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGAtt < 2:567630/143‑1 (MQ=255) tGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGCTGTTTCGTGAGGCAACTCAGCATTTTGGGCTCGACCGGCTCGATTgg > 1:790726/1‑143 (MQ=255) tGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCTGCTCGCTTgg > 1:790670/1‑143 (MQ=255) ttCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACGCACCATTCTGGGCTCGACCGGCTCGATTGGTTgca < 1:57824/143‑1 (MQ=255) tCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGTTCCTTGAGGTTTATGCT‑TTTGCTTATTGCTCAATCTGGTCTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTgcag < 2:826419/143‑1 (MQ=255) cTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTgcagc > 1:890879/1‑143 (MQ=255) aTTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACg < 2:770003/143‑1 (MQ=255) aTTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑ACTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACg > 1:227818/1‑143 (MQ=255) ttGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCAACATTCTGGGCTCGACCGGATCGCTTCGTTGCAGCATGCttgc > 2:816618/1‑140 (MQ=255) aaCGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACgt < 1:1145494/143‑1 (MQ=255) aaCGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCATTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACgg > 1:610211/1‑142 (MQ=255) cGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCCGCACGCGGGACgtgg > 1:796396/1‑143 (MQ=255) gACAAAAGCGCCGCTCAGTAGATCCTCGCCAATCT‑TCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACgtggt < 2:286010/143‑1 (MQ=255) gACAAAAACGCCGCTCAGTAGATCCTTGCGGAACG‑GCTCGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACgtggt > 1:223279/1‑143 (MQ=255) aCAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGGCgtggtg > 1:210281/1‑143 (MQ=255) aaaaCGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGGTTGGTTGCAGCACGCTGGACGGGGTgcgc > 1:921553/1‑143 (MQ=255) aaCGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCa < 1:1022677/143‑1 (MQ=255) ccgcTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCGTTCTATTCTGTCTCAACTCTGGACGTTTCCTTAAGCAACTCACCATTCGGGGCTCGCCCGGCTCGCTTGGTTGCAGCACCCTGGACGCGGTGCGACaacat > 2:1010197/1‑139 (MQ=255) cTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGCCCGGCTCGATTGGTTGCAGCCCGCTGGACGTGGTGCGCCATCATccc > 1:572396/1‑143 (MQ=255) ccAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCg < 1:78659/142‑1 (MQ=255) aTCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACtt > 1:448000/1‑143 (MQ=255) ccTTGCGGATCG‑GCTGGCGGCTTTTTGCTTTTTATGCGGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGATGTGGTGCGCCATAATCCCGAACACTTcc < 2:180925/143‑1 (MQ=255) ccTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGGTGGGTTGCAGCACGCTGGACGTTGTGCGCCATAATAGCGACAACTTcc > 2:621195/1‑143 (MQ=255) ccTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTcc < 2:851114/143‑1 (MQ=255) ttGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGACGCAACTCACCATTGTGGGCTGGACCGGCTCGATGGGTTGCAGCACGCTGGCCGTGGTGCGCCATAATCCCGCGCCCTTCcgt > 2:291194/1‑142 (MQ=255) ttGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGCTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTAGACGTCGTGCGCCAGAACCACGAacaccagcgc > 2:804267/1‑137 (MQ=255) aTCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGtt < 1:12866/143‑1 (MQ=255) gCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCCGCACGCTGGACGTGGTGCGCCATAATCCCCAACACTTCCGCGTCGTTgcgc > 1:256048/1‑143 (MQ=255) | TCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGATTTCTTGAACGACAAAAACGCCGCTCAGTAGATCCTTGCGGATCG‑GCTGGCGGCGTTTTGCTTTTTATTCTGTCTCAACTCTGGATGTTTCATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGC > NC_000913/193339‑193617 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |