New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2017028	68 (1.050)	3 (0.050)	3/280	10.0	4.5%	coding (475/1374 nt)	fliI	flagellum‑specific ATP synthase
	?	NC_000913	= 2017106	61 (0.950)					coding (553/1374 nt)	fliI	flagellum‑specific ATP synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGCGTGCACG  >  NC_000913/2016964‑2017245                                                                                                                                               |                                                                                                                                            ggAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCg                                                                                                                                             <  1:519350/143‑1 (MQ=255)  gAAACCGGTGCGCTGATGACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCgg                                                                                                                                            <  1:272156/143‑1 (MQ=255)     aCCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACGCCGGCGTGCGCCCAATCACTGCCCTGCTTGCCGTTGGGCGTCGTCAGCGTATGGGACTGTTTGCCGGGTCCGGAGt                                                                                                                                         >  1:192789/1‑143 (MQ=255)      ccGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGtt                                                                                                                                        <  2:1024952/143‑1 (MQ=255)       cGGTGGGCGGATGACCCCGCCGTTTACGCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGGCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTg                                                                                                                                       <  2:175978/143‑1 (MQ=255)       cGGTGCGCTGATTACCCCGCGATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTg                                                                                                                                       <  1:124230/143‑1 (MQ=255)         gTGCGCTGGTTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCGGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGt                                                                                                                                     <  1:888602/143‑1 (MQ=255)           gcgcTGATTACCCCGCCATTTAACCCGTTGCAACCTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTaa                                                                                                                                   <  1:712725/143‑1 (MQ=255)             gcTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAAGCAATGCCCTGCTTACCGTTGGGGGTGGGCAGCGCATGGGGCCTGTTGCCGGGAGCGTCGTTgggtcac                                                                                                                                 >  2:1032880/1‑138 (MQ=255)                 atgaCCCCGCCATGTTCCCCGTTGCACCGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTGACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAgtgt                                                                                                                             <  2:716763/140‑1 (MQ=255)                    agcccTCCACTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGtgct                                                                                                                          <  1:322773/141‑1 (MQ=255)                      cccGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGGCACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGtgctgc                                                                                                                        <  1:705282/143‑1 (MQ=255)                      cccGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGTCGTGCGCCCTATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAGAGTGtgctcc                                                                                                                        >  1:711169/1‑141 (MQ=255)                      cccGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCACTGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTCGCCGGGTCCGGCGTTGGTCACAGTGtgctgc                                                                                                                        >  2:378520/1‑143 (MQ=255)                       ccGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCGGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTgctgct                                                                                                                       >  2:1004852/1‑143 (MQ=255)                             tttcgcccGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGgat                                                                                                                 <  1:962136/138‑1 (MQ=255)                               tAACCCGTTGCAACGTACACCGATTGAACATGTGCGGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGgatga                                                                                                               <  1:1116574/143‑1 (MQ=255)                                    ccttccAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCa                                                                                                          <  1:256522/138‑1 (MQ=255)                                     gTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTGAACGTGTGCTGCTGGGGATGATGGCAc                                                                                                         >  1:442418/1‑143 (MQ=255)                                      ttGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACg                                                                                                        >  2:928840/1‑143 (MQ=255)                                        gCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGtt                                                                                                      <  2:1139425/143‑1 (MQ=255)                                          aaCGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTac                                                                                                    >  1:91836/1‑143 (MQ=255)                                              tACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTAGCGTTGGGCGCGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGCGAACAGTGTGCCGAGGGGGATGATGGCAGGTTacaaca                                                                                                >  2:1058021/1‑140 (MQ=255)                                              tACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACAccc                                                                                                >  1:1146390/1‑143 (MQ=255)                                                cacCGCCTGAACGTGTGCTAGGCACCGGCGTGCGCCCAAGCAATGCCCTGCGTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTTGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCcgc                                                                                              <  2:542207/143‑1 (MQ=255)                                                         caCATGGGCGGGGCGCCGGCGTGCGCCCAATCGTTTCCCTGCTTGCCGTTTTGCGTGGGCAGCGTATGGGGCTGCTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTc                                                                                     <  2:286828/142‑1 (MQ=255)                                                         aaCATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTAAGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGGGCTGCTGGGGCTGATGGCACGTTACAACCGCGCCGATGTc                                                                                     >  2:202286/1‑143 (MQ=255)                                                          aCATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCa                                                                                    <  1:653333/143‑1 (MQ=255)                                                          aCATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCa                                                                                    >  1:683003/1‑143 (MQ=255)                                                                 cTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGt                                                                             >  1:745892/1‑143 (MQ=255)                                                                 cTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGt                                                                             <  1:573429/143‑1 (MQ=255)                                                                   ggACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCTTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTgg                                                                           <  1:907994/143‑1 (MQ=255)                                                                   ggACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTgg                                                                           <  2:824294/143‑1 (MQ=255)                                                                       acCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGAGAGCGACTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGttt                                                                       >  1:264194/1‑143 (MQ=255)                                                                         cGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAATTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGa                                                                     <  1:1134530/143‑1 (MQ=255)                                                                         cGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCGTTGTCGTGGGTTTGa                                                                     >  1:443090/1‑143 (MQ=255)                                                                                    caatcaatGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGCCATTGTCGTGGGGCTGATTGGTGAACGt                                                          >  2:1147605/1‑143 (MQ=255)                                                                                        caacGCCCGGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGCGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGgc                                                      <  1:809541/143‑1 (MQ=255)                                                                                           cggcctcctTACCGTTGGGCGGGGGCTGCGTGTGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGcgcg                                                   <  2:327756/140‑1 (MQ=255)                                                                                             cccTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGaa                                                 <  1:846239/143‑1 (MQ=255)                                                                                             cccTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGAGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGGGGGGTTGATTGGTGAACGTGGGCGCGag                                                 >  1:498326/1‑142 (MQ=255)                                                                                             cccTGCTTACCGTTGGGCGTGGGCAGCGTAGGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCGGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGaa                                                 <  1:1112154/143‑1 (MQ=255)                                                                                             cccTGCTTACCGTTGGCCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGaa                                                 <  1:654784/143‑1 (MQ=255)                                                                                             cccTGCGTACCGTTTGGCGTGGGCAGCGTATGGGGGTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGaa                                                 <  1:1157814/143‑1 (MQ=255)                                                                                              ccTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAACGGGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGACACCATTGTCGGGGGTTTGATTGGGGCACGGGGGAGCGagg                                                >  2:838582/1‑141 (MQ=255)                                                                                                          tGGGCGTGGGCAGCGGATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTa                                    <  2:840729/143‑1 (MQ=255)                                                                                                            ggtgTGGGCAGCGTATGGGGCTGTTTGCCGGGTTCGGTGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGAGGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTAtt                                  <  1:317545/140‑1 (MQ=255)                                                                                                            ggCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTAtt                                  <  1:943056/143‑1 (MQ=255)                                                                                                             gCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTg                                 <  2:745892/143‑1 (MQ=255)                                                                                                               gTGGGAGGCGTTGGGGGCGGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTgag                               <  2:861935/143‑1 (MQ=255)                                                                                                                   gCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACa                           >  2:227926/1‑143 (MQ=255)                                                                                                                      gCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATGGTCGTGGGGTTGATTGGTGAACGTGGGCGCGGAGTAAAAGATTTTATTGGGAACAGcc                        >  2:955906/1‑143 (MQ=255)                                                                                                                         tATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCg                     <  1:130666/143‑1 (MQ=255)                                                                                                                         tATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCg                     <  1:872673/143‑1 (MQ=255)                                                                                                                             gggCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGc                 <  1:92933/143‑1 (MQ=255)                                                                                                                              ggCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGCTTGGTGAACGTGGGCGCGAAGTACAAGATTTTATTGAGAACATCCTCGGTGcc                >  2:479001/1‑143 (MQ=255)                                                                                                                              ggCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGACCATCCTCGGTGcc                >  2:514869/1‑143 (MQ=255)                                                                                                                                     tGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACTCCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTTGGCGCGAAGGAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGc         <  2:1037246/143‑1 (MQ=255)                                                                                                                                     tGCCGGGTCCGGCGTGGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGc         <  1:1094027/143‑1 (MQ=255)                                                                                                                                       cgtgcgccGGCTTTGGTAATAGTGGGCGGCTGGGGATGTTCGCACGTGAGACCCTCGCCGATGTCATTTTCGTTGGTTTGATTGGTGAACGTGGGCGCGATGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGCGt       <  2:355693/137‑1 (MQ=255)                                                                                                                                       ccGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGCGt       >  1:609687/1‑143 (MQ=255)                                                                                                                                         gggTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGCGTGc     >  2:855174/1‑143 (MQ=255)                                                                                                                                            tCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGCGTGCACg  <  1:504820/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                            GGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGCGTGCACG  >  NC_000913/2016964‑2017245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.