Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,875,521	0	T	C	24.4%	68.0 / 16.7	42	A28A (GCT→GCC)	yidX	putative lipoprotein
Reads supporting (aligned to +/- strand):  ref base T (13/18);  new base C (10/0);  total (24/18)
Fisher's exact test for biased strand distribution p-value = 2.06e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01
Rejected as consensus: Frequency below/above cutoff threshold.

GTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACT  >  NC_000913/3875266‑3875795                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                   gtAATGTAGTAAAAACTTATATTGTTTTACTACAATTTAGAACACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAAGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCa                                                                                                                                                                                                                                                                  <  2:358207/274‑1 (MQ=255)     tGTAGTAAAAACTTATATTGTTGGACTACAATTTATATCAAAAAAAGAACAAAGCATAAAAAAATGACATTCGTCGGTCAGAAATGTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTGTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGTTTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:868768/275‑1 (MQ=255)          taCAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGTGACAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTATAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGttt                                                                                                                                                                                                                                                                             >  1:671071/1‑254 (MQ=255)                    tatTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCTGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTa                                                                                                                                                                                                                                              >  1:128402/1‑275 (MQ=255)                         ttgtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTTTGCGCTTGTTTCCTTTACCGCAAATGGTAGCTACGGAAAGTATCat                                                                                                                                                                                                                                          >  1:245103/1‑273 (MQ=255)                         ttgtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCaa                                                                                                                                                                                                                                                                 >  2:902332/1‑251 (MQ=255)                           gtACGACAATTTAGATCACAAAAAGAACAATTCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAAAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCg                                                                                                                                                                                                                                       <  2:41970/275‑1 (MQ=255)                             actacAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  1:902333/251‑1 (MQ=255)                                 cAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAAGTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGGTTTCCTCTACAAAAAAGGCAAGGTCAGGAAAGTATCAAACGCAgccg                                                                                                                                                                                                                                 >  1:945618/1‑272 (MQ=255)                                   aTTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTAGTATGCCGTCGTTTGCTTGACAGAAAAGAGTGGTTCAGGGAAGTATAAATGGCAGTCAGa                                                                                                                                                                                                                               >  1:329772/1‑275 (MQ=255)                                         aTCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAATTAATACAGGAAAGTATCAATCGCAGTCAGACACCAt                                                                                                                                                                                                                         >  1:176210/1‑275 (MQ=255)                                             caAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTGTTTTGCTTTACCGAAAAGGGTAGTTCAGGAAAGTATAAATCGCAGTCAGACAACCTCACt                                                                                                                                                                                                                     >  1:864495/1‑275 (MQ=255)                                              aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCGGGAAAGTATCAATCGCAGTCAGACACCATAACTg                                                                                                                                                                                                                    >  1:30977/1‑275 (MQ=255)                                              aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTGTTCTGCCTTACAACAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTg                                                                                                                                                                                                                    >  1:1035521/1‑275 (MQ=255)                                                            aTAAAAAAACGGCCAGGGTCGGGAAGAGATCTGCAAAGGGTGTTCAGGCGCTAAACAGGAGTGTAGGAGGAGTATGGTTTGAACGGCTGGGCTACTCGGTTAAAGGAGTAATCATGAGGTGTGATGTTGAGGGATTTTGTAAGGCTGCAGGTTTATTCGCACTGGAGCCGAAGTTTTCAGGCTGTATCTGGTATGCTCTGGTTACCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCCGTCAGACACCATCACTGGGCTATAGCAGGCa                                                                                                                                                                                                      <  2:992147/275‑1 (MQ=255)                                                             tAAAAAAATGACATGGGTGGGGCAGAAATCTTAAAAGGGATATAAGGCGATAAACAGGGGGGAAAGAAGAGTATGCTTTCAACGGCTTAACTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAATGGATTTTGTAAGGCTGCCGGTTTATTCCCACTGGCGCTAATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCaa                                                                                                                                                                                                     <  2:295394/275‑1 (MQ=255)                                                                         atgctgcGGGGAGAAATCTGAAAAGGGATATCAGGCGCTAAAAAGGAGGGAAAGAAGAGTATGCTTTAAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAAGTTTAAGGGATTTGTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATg                                                                                                                                                                                         <  2:30977/269‑1 (MQ=255)                                                                                                  ggATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAgg                                                                                                                                                                >  1:315620/1‑275 (MQ=255)                                                                                                         aGGCGCTACACAGGAGGGAAAGAAGAGTATGATTTTAACGGCTTAGCGACTAGTTTAAAGGATTAATCATGAAGTTGAATTTTAATGGATTTTTTAAGGCTGCCGGGTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGAATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCATTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCg                                                                                                                                                         <  2:775484/275‑1 (MQ=255)                                                                                                               tagagtatagtgAAAGAAGAGTATGCTTTGAACGGCTTAGCTACTCGTTTAAACGATTAATCATGAAGTTGAATTTTAAGGGATGTTTTAAAGCTGCCGGTTTATTCCTACTGGCTCTGATGCGTTCAGGCTGTATCTCGGATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGAt                                                                                                                                                   <  2:57040/264‑1 (MQ=255)                                                                                                                   cAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTAcc                                                                                                                                               <  2:315620/275‑1 (MQ=255)                                                                                                                     ggaggGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCTGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCtt                                                                                                                                             <  2:128402/275‑1 (MQ=255)                                                                                                                     ggaggGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCtt                                                                                                                                             <  2:760473/275‑1 (MQ=255)                                                                                                                     ggaggGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTGTTCTGCTTTAACAAAAAAGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAAGCTATGTTTTTGTAGGGGAATCGCTGGATTAACt                                                                                                                                              >  1:210997/1‑274 (MQ=255)                                                                                                                         ggAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTTAAAGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGCTCGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATAGCTGGATTACCTTATCa                                                                                                                                         >  1:1030277/1‑275 (MQ=255)                                                                                                                                   gTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGc                                                                                                                               >  2:824844/1‑275 (MQ=255)                                                                                                                                   gTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGc                                                                                                                               >  1:191413/1‑275 (MQ=255)                                                                                                                                                       cTACACGGTTAAAGGATTAAGCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCATGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATg                                                                                                            <  2:191413/274‑1 (MQ=255)                                                                                                                                                                       ttAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCACAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGAAATCGTTAAGATGCTCAATGATCCAGCACt                                                                                           >  1:279387/1‑275 (MQ=255)                                                                                                                                                                           taaTGAAGTTGAATTTTAAGGGTGTTTGTGAGGTTGCCGGTTTATTACCACTAGCTCGTATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGGAAAGGGTAGTTCAGGAAAGGATCAATCGCAGTCAGACAACATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATTCAGGACTTAAc                                                                                       <  2:347486/273‑1 (MQ=255)                                                                                                                                                                               gAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTCCTTTACAAAAAAGAGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATAGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGACTCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTACAGTGCTCAATGGTCCAGCAATAAACCGGc                                                                                   >  1:962522/1‑275 (MQ=255)                                                                                                                                                                                aaGTTTAAGTTGAAGGGATTTTTTAATGCTTGCGGTTTAGTGCCACGCGCGATGATGCTTTCAGGCTGTATCTCGTATCATCTGCATTCCCATAACGCAAAGGGTAGTTCAGGAAAGTATCAAGCGCAATCAGACACCATCACTGGGCTATAGAAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGTGGAATAGCTGGATTACCTTATCACTGATGGTGCCGATTACATCGTTAAGATGCTCAATGATCCAGCTCTTAACCGGca                                                                                  <  2:1035520/275‑1 (MQ=255)                                                                                                                                                                                                               ccGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGGTTTGCCTTACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTTGGCTATCGCAGGCAAAAGATAGTACTGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTACGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCCGGTTGCCGATGAAGCAAGAttt                                                   >  1:85393/1‑275 (MQ=255)                                                                                                                                                                                                               ccGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTCCTTTACAACAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGAttt                                                   >  1:369401/1‑275 (MQ=255)                                                                                                                                                                                                                    ttATTCCCACTGTCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGtttt                                              <  1:824845/275‑1 (MQ=255)                                                                                                                                                                                                                            aCTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCAc                                                                                                                                                                                                                      >  2:779997/1‑99 (MQ=255)                                                                                                                                                                                                                             cTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTGGTTTGCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATAGTTAAGATGCTCAATGCTCCAGCACTTAACCGGCACAATATTCAGGTTGCCGCTGAAGCCAGATTGGTTTTAAATGCgg                                      >  1:773883/1‑274 (MQ=255)                                                                                                                                                                                                                                gcgcTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTggg                                                                                                                                                                                                                  <  1:779997/99‑1 (MQ=255)                                                                                                                                                                                                                                                    tATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTTGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCAAGCACTTAACCGGCACACTATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGAGGGGAAAAAGAAATTTCCCggaccaa              >  2:332071/1‑270 (MQ=255)                                                                                                                                                                                                                                                     aTCTCGTATGCCCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCAATTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGAACaa              >  1:678955/1‑274 (MQ=255)                                                                                                                                                                                                                                                      gctcGTATGCTCTGGTTTCCAATACCGGAAAGGGTAGTTCAGGAAAGAAACAATCGCAGTCAAAAACAATCACTGGGCTATCGCAGCCAAAAGATAGTAATGGAACAAAAGGCGATGTTATTGTAGGGGAATCGCTGGGTTACCTTATCGCTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATAATCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGAGGGGAAATAGAAATTTTCCTGCACAata            <  2:876299/274‑1 (MQ=255)                                                                                                                                                                                                                                                              gCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTta    >  2:99321/1‑275 (MQ=255)                                                                                                                                                                                                                                                                tctGGTTTCCCATACCGCAAAGGGGAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCAAGCACTTAACCGGCACAATATTCAGGTTGCCGATGAAGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATGTACCGGCCCAATCTCGCTTtact  >  2:92489/1‑275 (MQ=255)                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                   GTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACT  >  NC_000913/3875266‑3875795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑