New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 202024 =63 (1.020)3 (0.050) 3/268 9.2 4.9% intergenic (+28/‑77) lpxD/fabZ UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase/(3R)‑hydroxymyristol acyl carrier protein dehydratase
?NC_000913 202060 = 57 (0.980)intergenic (+64/‑41) lpxD/fabZ UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase/(3R)‑hydroxymyristol acyl carrier protein dehydratase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGAACGGGAAACGGTGCGGCAGAAGTTCTAAAATCTCTTCAATCTGCAGAGTATGAGTGTTAGTAGTCAAGATACTCTTCCTGTCAAAATATAAGAAACGACAATAATAACACGGCCTGCCGCAATCGTAAGAATGAGACAGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/202170‑202024
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgtGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGATCGCGTGCTGGATTTTGA  >  NC_000913/202060‑202198
                                                                                                                                                                                                                                                                                              
AGAGCGGGGAACGGCGCGGCAGAAGTTCTAAAAGCTCTTCAATCTGCAGAGTATGAGTGTTAGTAGTCAAGATACTCTTCCTGTCAAAATATAAGAAACGACAAGAATAACACGGCCTGCCGCAATCGTAAGAATGAGACAGG                                                                                                                                                 <  2:364078/143‑1
  AACGGGAAACGGTGCGGCAGAAGTTCTAAAATCTCTTCAATCTGCAGAGTATGAGTGTTAGTAGTCAAGATACTCTTCCTGTCAAAAGATAAGAAACGACAATAATAACACGGCCTGCCGCACTCGTAAGAAAGAGACAGGCC                                                                                                                                               >  2:365507/1‑143
    CGGGAAACGGTGCGGCAGAAGTTCTAAAATCTCTTCAATCTGCAGAGTATGAGTGTTAGTAGTCAAGATACTCTTCCTGTCAAAATATAAGAAACGACAAGAATAACACGGCCTGCCGCAATCGTAAGAATGAGACAGGCCGT                                                                                                                                             >  2:789217/1‑143
                                                                                     AAAATATAAGAAACGACAATAATAACACGGCCTGCCGCAATCGTAAGAATGAGACAGGCCGTGTTATTATTGTCGTTTCTTATATTTT                                                                                                                   >  1:75388/1‑88
                                                                                     AAAATATAAGAAACGACAATAATAACACGGCCTGCCGCAATCGTAAGAATGAGACAGGCCGTGTTATTATTGTCGTTTCTTATATTTT                                                                                                                   <  2:75388/88‑1
                                                                                                              CACGGCCTGCCGCAATCGTAAGAATGAGACAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCC                                   >  1:527522/1‑143
                                                                                                                                            AGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGCTTGAAGAGATTTTAGAACTTCTGCCGCCCCGTTTCCCCTTCTTACTGGTGGATCGCGTGATGGGTTT     >  2:505811/1‑143
                                                                                                                                            AGGCCGTGTTATTATTGACGTTTCATATATTTTGACAGGAAGAGAATCTTGAATACTAACACTCATACTCTGCAGATTGAAGAGATTATACAACTTCTGCCGCACCGTTACACGATCTTACTGGAGGATCGCGTGCTCGAcac     >  2:1056562/1‑140
                                                                                                                                               CCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTATTACTGGTGGATCGTGTGCTGGATTTTGA  >  2:409641/1‑143
                                                                                                                                                                                                                                                                                              
AGAACGGGAAACGGTGCGGCAGAAGTTCTAAAATCTCTTCAATCTGCAGAGTATGAGTGTTAGTAGTCAAGATACTCTTCCTGTCAAAATATAAGAAACGACAATAATAACACGGCCTGCCGCAATCGTAAGAATGAGACAGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/202170‑202024
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgtGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGATCGCGTGCTGGATTTTGA  >  NC_000913/202060‑202198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.