Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,296,0600CT30.9% 93.1 / 42.9 83intergenic (+266/+376)gltP/yjcOglutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein
Reads supporting (aligned to +/- strand):  ref base C (35/21);  new base T (16/9);  total (53/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01
Rejected as consensus: Frequency below/above cutoff threshold.

AGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTT  >  NC_000913/4295920‑4296199
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aGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTAGCGTGCTTTTGTACGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGc                                                                                                                                           >  1:62511/1‑143 (MQ=12)
  gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCt                                                                                                                                         >  1:1022056/1‑143 (MQ=32)
  gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCt                                                                                                                                         >  1:597953/1‑143 (MQ=32)
      ctctGCCGCCTCCCACAGCGACGCCTGATGCGACGCGTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATg                                                                                                                                     <  2:753179/140‑1 (MQ=11)
         tGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCGAGCGAGAGCGATAGCCGGAGTTAGCGAGAGTTTGTAGGCGGGATAAGGCGGGTGCGCCGCGTACGACATCAAAGCCTGATGGGa                                                                                                                                  >  2:1028167/1‑143 (MQ=11)
         tGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGa                                                                                                                                  <  1:915946/143‑1 (MQ=17)
          gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGAc                                                                                                                                 >  2:906727/1‑143 (MQ=17)
          gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATACGACATCAATGCCTGAtcagcc                                                                                                                                 >  2:1057185/1‑138 (MQ=12)
           ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTGATTTTGTAGGTCGGATAGGGCGTTTACGCCGCATCGGACATCAACGCCTGATGCGACg                                                                                                                                >  1:332844/1‑143 (MQ=12)
           ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATCAGGCGTTTACGCCCCATCCCACACCAATGCCTGACCCGACg                                                                                                                                >  2:481208/1‑143 (MQ=11)
           ccGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCACTGCCTGATGCGACg                                                                                                                                >  2:612895/1‑143 (MQ=17)
            cGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTCCGCCGCATCCGACCTCAATGCCTGATGCGACGc                                                                                                                               >  2:32486/1‑143 (MQ=12)
               aTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCCATAGCCTGCTTTCGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACGTCAATCCCTCATGGCACGCTTg                                                                                                                            >  2:508473/1‑143 (MQ=11)
                tCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCCATGCCTGATTCGACGCTTGc                                                                                                                           >  2:605661/1‑143 (MQ=16)
                  cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCcg                                                                                                                         >  1:133806/1‑143 (MQ=35)
                  cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCcg                                                                                                                         >  1:85019/1‑143 (MQ=35)
                   ggcATCGACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCcgc                                                                                                                        <  1:411094/141‑1 (MQ=37)
                   gACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAAGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCATACTGCGACACTTGCcgc                                                                                                                        >  2:17709/1‑143 (MQ=11)
                     cATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCGGACGGCGCAATAGCGTGAGTTGGCGTGATTTTGTGGGTCGGATAAGGCGGTTGCGCCGCATCCGACATCCATGCCTGATGCGTTGCTTGCCGCGt                                                                                                                      >  1:376134/1‑143 (MQ=11)
                     cATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGt                                                                                                                      <  1:1080377/143‑1 (MQ=38)
                      aTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGCTGCGACGCTTGCCGCGTc                                                                                                                     >  1:130175/1‑143 (MQ=255)
                      aTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCGGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTc                                                                                                                     >  1:753179/1‑143 (MQ=38)
                       tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGCCGCTTGCCGCGTcc                                                                                                                    >  2:215618/1‑142 (MQ=25)
                       tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCt                                                                                                                    >  2:1081320/1‑143 (MQ=25)
                        gtaggCCTGATACGACGCTGCACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGCCGCTTACCGCGTCtt                                                                                                                   >  2:40910/5‑143 (MQ=11)
                        cAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGCTAAGGCGTTTACGCCGCGTGCGACACCAATGCCTGATGCGACGCTTGCCGCGTCtt                                                                                                                   >  1:1056247/1‑143 (MQ=11)
                         aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCTGCGTCTTa                                                                                                                  >  2:690857/1‑143 (MQ=21)
                          aCGCCTGGTGCGGCGTTTAACTCGTCTTATCCGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                                                                 <  2:1022056/143‑1 (MQ=11)
                          aCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                                                                 <  2:597953/143‑1 (MQ=25)
                            gCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACCGCGACCTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGAGTTTACGCCGCCTCCCCCACCAATGCCTGATGCGACCCTCGCCGCGTCCTaagc                                                                                                               >  2:611414/1‑140 (MQ=11)
                              cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATATCCTGCTTTCGCGTGACTTTCTAGGTCGGATAATGCATCTACACCGCATCCGACATCAACGCCTTATTCGACGGTTGCCGCATCTCATCAgg                                                                                                             >  2:375484/1‑143 (MQ=11)
                                gATGCGACGCTTAACGCTTCTTATCAGGCCTCCGCCAGACACCGCACTAGCCTGATTTAGCTTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                           <  2:183779/143‑1 (MQ=14)
                                gATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                           <  1:376380/143‑1 (MQ=39)
                                  tGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTGAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                         <  1:120240/143‑1 (MQ=255)
                                   gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTat                                                                                                        <  1:1028167/143‑2 (MQ=21)
                                     gACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                                                                 <  2:147041/132‑1 (MQ=18)
                                         cTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAAc                                                                                                                                             >  1:650493/1‑100 (MQ=34)
                                         cTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCCTGCCGCGTCTTACCACGCCTAccttaac                                                                                                  >  1:671154/1‑137 (MQ=11)
                                                cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa                                                                                                                  <  1:425613/120‑1 (MQ=25)
                                                cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTa                                                                                                                  >  2:425613/1‑120 (MQ=37)
                                                 gTCTTTTCTGGCTTACGCGAGACGGCGAACTAGCAGGATTTCGCGTGATTTTGCAGGTCGGATAAGGCGTTTACGCCGCGTCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCaa                                                                                          <  2:141193/143‑1 (MQ=14)
                                                    ttATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc                                                                                                                                           <  2:599386/91‑1 (MQ=21)
                                                     gctCAGGCCTACGCCCGCCCGCGCAATGGCCTGATTTCGCGTGATTTTGTAGGTCGGACAGGGCGTTTACGCCGCGTCCGGCATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGc                                                                                      <  2:134524/141‑1 (MQ=14)
                                                      aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGTCGTTTATTCCATATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACGGCGCAATAGcc                                                                                     >  1:1112003/1‑143 (MQ=11)
                                                         aGGCCTACGCCAGACAGCGCAATAGCCTTATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCGGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGa                                                                                  <  1:201775/143‑1 (MQ=255)
                                                         aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCcgcg                                                                                                                       <  2:73224/106‑1 (MQ=38)
                                                         aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCcgcg                                                                                                                       >  1:73224/1‑106 (MQ=40)
                                                             cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTa                                                                              <  1:836832/143‑1 (MQ=39)
                                                              gaCGCCAGACAGCGCAATAGCCTGACTTAGCGTGATTTGCTCGGTCTGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAg                                                                             <  1:205040/142‑1 (MQ=14)
                                                               aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGc                                                                            <  1:989243/143‑1 (MQ=39)
                                                                      aCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCGGCGCGATCGCCTGAGCTAGCGGGAtgt                                                                     >  2:1057246/1‑141 (MQ=11)
                                                                          cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGa                                                                                                  >  2:1100513/1‑110 (MQ=14)
                                                                           gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTATACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAg                                                                <  1:561084/143‑1 (MQ=38)
                                                                                   cTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCTAGACGGCGCGATAGCCTGCGTTCGCGTGATTCTGTACGTCGGAtg                                                        >  1:4812/1‑142 (MQ=14)
                                                                                    tGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCa                                                                                                    >  2:1028562/1‑98 (MQ=17)
                                                                                    tGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCa                                                                                                    <  1:1028562/98‑1 (MQ=255)
                                                                                    tGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATCTCGCGTGATTTTGTAGGTCGGCTaa                                                       >  1:1024699/1‑143 (MQ=255)
                                                                                                aTTTTGTTGGGCGGATAAGGCGTGTCCGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGcc                                           <  2:871665/143‑1 (MQ=255)
                                                                                                 ttttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACGGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGGTAGGGCGTTTGTGctg                                          >  1:485575/1‑141 (MQ=255)
                                                                                                   ttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATCAGGCGGTTATGCCGCa                                        >  1:219208/1‑143 (MQ=255)
                                                                                                   ttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACCCCAGACAGCGCAATAGCCTGATTTAGCGTGATTCTGTGCGTCGGACACAGCGTTTCTGCCCCa                                        >  2:165676/1‑143 (MQ=14)
                                                                                                    tGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAGGGCGTTTATGCCGCAt                                       >  1:48972/1‑143 (MQ=38)
                                                                                                        ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTCGCGTGACTCTCGAGGTCGGATACGGCGTTTATGCCCCacacca                                   >  2:524458/1‑138 (MQ=14)
                                                                                                         gTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                            <  2:225597/69‑1 (MQ=255)
                                                                                                         gTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                                                            >  1:225597/1‑69 (MQ=255)
                                                                                                                 aGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATCTAGCGGGATTTCGTAGGTCGGAGAAGGCGCGTAGGCCGCATCCGACGTCGACGc                          >  2:1068748/1‑143 (MQ=14)
                                                                                                                   gCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTCTCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGACTTCCTAGGTCGGCCCCGGCGATTATGCCCCATCCGACCCCACCGccc                        >  2:1037337/1‑142 (MQ=11)
                                                                                                                   gCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTCGTAGGTCGGATACGGCGTTTATGCCGCGTCCGACACCACCGccc                        >  2:807164/1‑142 (MQ=14)
                                                                                                                          cgccgcATACGGCATCAGCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGa                 <  1:344598/143‑1 (MQ=255)
                                                                                                                           gccgcATCCGACATCAACGCCTGATGCGACGGTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAGTGGACGGGTTTAGCGTGATGTTGTAGGTCGGAGAAGGCGGGGAGGCCGGACCCGCCGGCAACGCCTgccgggcg                >  2:74096/1‑136 (MQ=2)
                                                                                                                           gccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAGCTCGGTTATGCCGCATCCGACATCAACGCCTGATGCGAc                >  2:230177/1‑143 (MQ=255)
                                                                                                                           gccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCAGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCCACGCCTGATGCgcc                >  1:1091957/1‑141 (MQ=255)
                                                                                                                            ccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGCCg               >  1:837749/1‑143 (MQ=25)
                                                                                                                             cgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAgg                                                     <  1:746301/104‑1 (MQ=38)
                                                                                                                                aTCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTa           >  2:915946/1‑143 (MQ=35)
                                                                                                                                  ccGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGCTGCGACGCtgacc         >  1:402684/1‑139 (MQ=255)
                                                                                                                                   cGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCTGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAAcg        <  2:85019/143‑1 (MQ=21)
                                                                                                                                   cGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCGACGCCTGATGCGGCGCttcccg        >  2:563308/1‑139 (MQ=255)
                                                                                                                                        tgaaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGc                                                    <  2:878735/92‑1 (MQ=14)
                                                                                                                                        tCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCt   >  1:918596/1‑143 (MQ=33)
                                                                                                                                        tCAACGCCTGATGCGACGCTCGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCt   <  1:1008773/143‑1 (MQ=18)
                                                                                                                                        tCAAAGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAAGAGCTAGCTTTAGCGTGATTTGGTAGGTCGGATAAGACCTTTATGCGGCATCGGACATCGAGCCCTGACGTCACGCTTAACGCGTc  >  2:95972/1‑142 (MQ=11)
                                                                                                                                         cAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGCCta  >  2:28055/1‑142 (MQ=12)
                                                                                                                                         cAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCtt  <  1:770360/143‑1 (MQ=32)
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AGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTT  >  NC_000913/4295920‑4296199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: