New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4020535 | 47 (0.920) | 3 (0.060) | 3/270 | 7.8 | 6.7% | coding (310/1641 nt) | ubiB | regulator of octaprenylphenol hydroxylation, ubiquinone synthesis; regulator of 2'‑N‑acetyltransferase; putative ABC1 family protein kinase |
? | NC_000913 | = 4020568 | 39 (0.800) | coding (343/1641 nt) | ubiB | regulator of octaprenylphenol hydroxylation, ubiquinone synthesis; regulator of 2'‑N‑acetyltransferase; putative ABC1 family protein kinase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CAAGTTCGGGCAAATGTTATCAACCCGCCGCGATCTTTTTCCACCGCATATTGCCGATCAGCTGGCGTTATTGCAGGACAAAGTTGCTCCGTTTGATGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4020432‑4020535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaagcCGCCCATTGCAGCTTCAATCTGCTGCTTCGCCAGCTTGCCATCAAACGGAGCAACTTTGTCCTGCAATAACGCCAGCTGATCGGCAATATGCGGTGGAAAAAGATCGCGGCGGGTTGATAACATTTGCCCGAACTTGAT < NC_000913/4020568‑4020430 CAAGTTCGGGCAAATGTTATCAACCCGCCGCGATCTTTTTCCACCGCATATTGCCGATCAGCTGGCGTTATTGCAGGACAAAGTTGCTCCGTTTGATGGCAAGCCGCCCATTGCAGCTTCAATCTGCTGCTTCGCCAGCTTGC < 1:642862/143‑1 AGTTCGGGCAAATGTTATCAACCCGCCGCGATCTTTTTCCACCGCATATTGCCGATCAGCTGGCGTTATTGCAGGACAAAGTTGCTCCGTTTGATGGCAAGCCGCCCATTGCAGCTTCAATCTGCTGCTTCGCCAGCTTGCCA < 1:679234/143‑1 TTCTGGCAAATGTTATCACCCCGCCGCGATCTTTTTCCACCGCATATTGCCGATCAGCTGGCGTTATTGCAGCATAAATTTGCTCCGTTTGAGGGCAAGCCGCCCATTGCAGCTTCAATCTGCTGCTTCGCCAGCTTGCCATC < 1:85513/143‑1 AAGCCGCCCATTGCAGCTTCAATCTGCTGCTTCGCCAGCTTGCCATCAAACGGAGCAACTTTGTCCTGCAATAACGCCAGCTGATCGGCAATAGGCGGTGGAAAAAGATAGCGGCGGGTTGATAACATTTGCCAGAACTTGAT > 2:49864/1‑143 CAAGTTCGGGCAAATGTTATCAACCCGCCGCGATCTTTTTCCACCGCATATTGCCGATCAGCTGGCGTTATTGCAGGACAAAGTTGCTCCGTTTGATGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4020432‑4020535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaagcCGCCCATTGCAGCTTCAATCTGCTGCTTCGCCAGCTTGCCATCAAACGGAGCAACTTTGTCCTGCAATAACGCCAGCTGATCGGCAATATGCGGTGGAAAAAGATCGCGGCGGGTTGATAACATTTGCCCGAACTTGAT < NC_000913/4020568‑4020430 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |