New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 730507NA (NA)4 (0.080) 4/272 7.1 7.9% coding (925/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 730543 49 (0.960)coding (961/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGAC  >  NC_000913/730394‑730645
                                                                                                                 |                                                                                                                                          
ccGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGccc                                                                                                               <  1:183595/143‑1 (MQ=11)
ccGCTTTCCCTGGTGCCCTGCCGGGTTACACCGAATATGGCCGGGACGACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGccc                                                                                                               <  2:9585/143‑1 (MQ=2)
  gcgttgccTGATACCCTGCCGGGTTACACCGAATACGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCcg                                                                                                             <  1:233028/137‑1 (MQ=12)
       tCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCCCCGGTGCGCGATCGCTGGACGCCCCgcgccg                                                                                                        >  2:836244/1‑143 (MQ=11)
        ccTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCggggcgg                                                                                                       >  1:563865/1‑142 (MQ=17)
         cTGATACCCTGCCGGGTTACACCGAATATGGCCGGGGCAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCgcggcgca                                                                                                      >  1:590528/1‑141 (MQ=17)
           gATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGGCCCGGAATACCCGGAGAATTTGCCTGCCGCGCCGCCGGTCCGCTAGGGCTGGACGGCCCCCGGCGAACt                                                                                                    >  2:72733/1‑143 (MQ=11)
           gATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGGGCGCCAGGGCTGGACGCCCCGCGGCGaccg                                                                                                    >  2:702234/1‑140 (MQ=255)
              aCCCGGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTggc                                                                                                 <  2:907092/143‑1 (MQ=17)
                ccTGCCGGGTTACACCGACTATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAAGACCCGAAGACGTTACCTGCCGCGCCCCTAGCTCGCTATGGCTGCACGCCCCTCCGCGAACtcggcg                                                                                               >  2:831278/1‑138 (MQ=11)
                ccTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTggcgg                                                                                               >  1:584689/1‑143 (MQ=32)
                   gCCGGGTTACGCCGAAGATGGCCGGGACACCGGCAGCCGTCTGGCTGCCGTGTGGCTGACGCACGACCCGGAAGACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGcggcgg                                                                                            <  2:428764/143‑1 (MQ=11)
                   gCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGcggcgg                                                                                            <  1:102882/143‑1 (MQ=35)
                      gggTTATACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGgtgt                                                                                         <  2:426951/143‑1 (MQ=21)
                        gTTACCCCGAAGAGGGGCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTAt                                                                                       <  2:776886/143‑1 (MQ=255)
                         ttACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCCGCCCCGCCGCTGGGGCGCCATGGCTGGCCGCCCCGCGGCGAACTCGcgccgggctctg                                                                                      >  2:547294/1‑137 (MQ=11)
                          tACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGa                                                                                     <  2:454313/143‑1 (MQ=35)
                           acacCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGAc                                                                                    <  1:729478/143‑1 (MQ=35)
                             acCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGGAGGACCg                                                                                  >  2:757351/1‑143 (MQ=25)
                                        ccGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATacac                                                                       >  1:262554/1‑143 (MQ=255)
                                              cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAGTACACCGGTgc                                                                 >  1:140362/1‑143 (MQ=255)
                                               aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCGGCGCCGCTCGTCCGCTATGGCGGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTgcg                                                                <  1:909451/143‑1 (MQ=255)
                                                  ggCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAg                                                             <  1:173535/143‑1 (MQ=255)
                                                    cATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCt                                                           >  1:687828/1‑143 (MQ=255)
                                                          tctgtctgCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTttactt                                                     <  2:16081/143‑1 (MQ=255)
                                                            tgtctgCCGTGCGGCTGGCGCGCGACCCGGCATACCCGGAGAAGTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTttacttac                                                   <  2:806253/143‑1 (MQ=17)
                                                            ggtctgCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGTTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTttacttac                                                   <  1:44165/142‑1 (MQ=255)
                                                             gccggCCGTGTGGCTGACGCACGCCCCGGAATCCCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACg                                                  <  2:422401/139‑1 (MQ=255)
                                                              tctgCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTCCCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACga                                                 <  2:89280/143‑1 (MQ=255)
                                                              tctgCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGGCGCCCCGCCGCGAAATGGCCGCGGGGTATGACCGGAGCAATACACAGGTACGGAGCTTTACTTCCga                                                 >  2:849468/1‑143 (MQ=17)
                                                                              cGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACGGGGGc                                 >  1:237231/1‑143 (MQ=255)
                                                                               gCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCATCCATCCACAGGTGCGCAGCTTTACTTACGATGCTCAATACCGGGGcc                                >  2:430243/1‑143 (MQ=14)
                                                                               gCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACCGGTGCGCAGCTTTACTTACGATGATCAATCCCGGGGcc                                >  1:441442/1‑143 (MQ=255)
                                                                                   gACCCGGAATGCCCGGAGAAGTTACCTGCCGCGCCGCGGGTGCGCTATGGCTGGACGCCCCGCGGCGAACGGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGAt                            <  2:909245/143‑1 (MQ=255)
                                                                                     cccGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGAtgg                          >  1:886960/1‑143 (MQ=255)
                                                                                      ccGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGAtggt                         <  1:400423/143‑1 (MQ=255)
                                                                                       cGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGAtggtg                        <  2:640789/143‑1 (MQ=255)
                                                                                              cccGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTTGATGCGCCTCTGCGAACTGGGGGCGGGGGATGACCGCCGCAATACACAGGTTCGCTGTTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCAcc                 <  1:125657/143‑1 (MQ=17)
                                                                                                cGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGAGGGGGGCGCGCCgg               >  2:703664/1‑142 (MQ=255)
                                                                                                   agaATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGAGGGTGGCGCACCCTcac            >  2:622171/1‑143 (MQ=255)
                                                                                                    gcaTTCACCTGCCGCGCCGCTGGTGCGCTATCGCTGGACGCCCCGAGGCGAGCTGGCGGCGGTCTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTcaca           <  1:466923/141‑1 (MQ=17)
                                                                                                       tttACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGCTGGTGGCGCACCGCCACGCgg        >  2:450814/1‑143 (MQ=255)
                                                                                                            cTGCCGCGCCGTTGGTGCGCGATGGCTGGGCGCCCCGCGGCGAACTGGCGGCGGTGTACGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGa   <  2:806938/143‑1 (MQ=255)
                                                                                                            cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATCCACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGAGGGTGGCGCACCGTCACACGGGCCGa   >  1:359611/1‑143 (MQ=255)
                                                                                                             tGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGCTGGTGGCGCACCGTCACACgtggggaa  >  2:637891/1‑136 (MQ=255)
                                                                                                                 |                                                                                                                                          
CCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGAC  >  NC_000913/730394‑730645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.