| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.020) | 46 (0.900) | 39/284 | 0.3 | 97.9% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001509‑4001783 | gtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacggttctttgaagacgacgacggcctgcctct > 1:439767‑M2/142‑143 (MQ=255) atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 1:100500‑M2/4‑1 (MQ=255) ggattgatcttggcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCctt < 1:274519‑M2/6‑1 (MQ=255) attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttct < 2:871038‑M2/8‑1 (MQ=255) cgatctggtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtgtctttgaagacgacgacggcctgcatCTCcttcttc < 2:295614‑M2/10‑1 (MQ=255) gTCGAAGCGGAAGACGAGGCGCGTCTGCGCGGTCCGTCTGAAGTTGACTGGGGCCTGGCACTACGCCCGGACCTGGCAGACCTGGAAGCATCGGCACGTTTCTTTGAAGCCGACATCGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTg < 2:324328/143‑1 (MQ=255) atcttgtcgaaccggacgactacgagcgactgcgcgcacaatctgaccttggtcagagcctggcaacccgcccggtactgcaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttctt < 1:126599‑M2/12‑1 (MQ=255) atcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcctCTCcttcttctt > 2:375489‑M2/132‑143 (MQ=255) ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttctt > 1:845575‑M2/129‑143 (MQ=255) cggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc > 2:88710‑M2/120‑143 (MQ=255) cggaccacgacgagcgaccgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 1:100912‑M2/24‑1 (MQ=255) acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa < 1:90966‑M2/27‑1 (MQ=255) gacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaaggcatcgaagcatgggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGTAg > 1:395422‑M2/115‑143 (MQ=255) cgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagtcgtcgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAc < 1:496371‑M2/34‑1 (MQ=255) gcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacggttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCcggtaccgc > 1:504686‑M2/99‑139 (MQ=255) cgtacaatccgaacttggccacagcctggcaacccgcccggaaccggaagacatcgacgcatcggcacgttgctctgaagactacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTcc < 1:795749‑M2/46‑1 (MQ=255) actctgaacctcgccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacgtcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgt < 2:724880‑M2/51‑1 (MQ=255) cgcggaacgtgggcagagcctggcaacccttccggaactggaagacatcgaagcatcggcacggttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCCCtgtg < 2:663112‑M2/52‑1 (MQ=255) atcggaactctgccagagcctggcaacccgcccggaactggaagccatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 1:541962‑M2/52‑1 (MQ=255) gtgagcttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGc < 2:607012‑M2/54‑1 (MQ=255) tgaacttggcccgagcctggcaaggtgtatgatagttgaaaacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACGCCACTGTGGCa > 2:653684‑M2/89‑143 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa > 1:677794‑M2/89‑143 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacggtgctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAc > 1:637322‑M2/84‑143 (MQ=255) gagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcacCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCcgc > 2:743438‑M2/77‑142 (MQ=255) gcccggaactggaagacatcgcagcatcggcacgtttctttgacgatgacgaggttcttcatCTTCTTCTTCTTCTTTGAAGAGGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 1:663842‑M2/81‑1 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg > 1:874556‑M2/52‑143 (MQ=255) aagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCGGTGATGGTCGTCTGTTTACTCtgcgtgg > 1:842248‑M2/51‑142 (MQ=255) agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag > 2:467181‑M2/50‑143 (MQ=255) agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag > 1:431710‑M2/50‑143 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgcgcgtg > 2:623549‑M2/46‑143 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtg < 1:600246‑M2/98‑1 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTGACTCTgcgtgagcgtg > 1:26508‑M2/46‑143 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCCTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGGGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:45346‑M2/100‑1 (MQ=255) cggcacgttgctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGc < 1:54799‑M2/108‑1 (MQ=255) gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtt > 1:435080‑M2/34‑143 (MQ=255) cacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGCTCACGCCGGTCACTCCACTGTGGCATTTACCATCCGTGATGCCCGTCTGTTTACTCCGCGTGACCGTCACCCGCCCGCttt > 2:417155‑M2/33‑143 (MQ=255) cgtttctttgaagactacgccggtctgcgtCGCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAAGTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTc < 2:170814‑M2/113‑1 (MQ=255) cgtttctgttaagtcgctgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTc < 2:867386‑M2/113‑1 (MQ=255) cttctttgatgacgacgactgtctgcatCTTCTTCTTCTTCTTTGAGGTTGCGGAAGATCACGTCGGTAACTTCACTGTGTCATTTGCCATCCGTGGTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 2:695443‑M2/115‑1 (MQ=255) tctttggagacgacgacggcctgcctCGCCTTGTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 1:153374‑M2/117‑1 (MQ=255) tcgttgaggacggcggctgcctgcatCCCCTTCTTCTTCTTTGAATATGCGGAAGATCACGCCGGTAACTACACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:696363‑M2/117‑1 (MQ=255) ttgaagacgacgacggcctgcctCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTa < 2:287557‑M2/120‑1 (MQ=255) aagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCg < 1:323781‑M2/123‑1 (MQ=255) gcgacggcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt < 2:526938‑M2/126‑1 (MQ=255) gacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACGATAGGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATAGTATGc > 1:783410‑M2/16‑143 (MQ=255) acggcctgcatCTCCTTCGTCTTCGTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGc < 1:375489‑M2/132‑1 (MQ=255) ggcctgcatCGCCTCCCTCTTCGGTGGAGATGCGGAAGATCACGCCGGTAACTCCGCTGTGGCATGGACCATCCGTGATGGTCGTCTGTTTTCTCTGCGTGAGCGTTAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGccc < 1:175300‑M2/134‑1 (MQ=255) | GATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001509‑4001783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |