| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,201,278 | A→C | 20.6% | G137G (GGT→GGG) | zraP ← | Zn‑dependent periplasmic chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,201,278 | 0 | A | C | 20.6% | 140.0 / 3.7 | 59 | G137G (GGT→GGG) | zraP | Zn‑dependent periplasmic chaperone |
| Reads supporting (aligned to +/- strand): ref base A (41/4); new base C (2/12); total (43/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCTT > NC_000913/4201047‑4201515 | gcTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCCTGGCTGGAACCGCCCGAAAGTTCGCAATTACTGTTAGTGGCAAACCCTGTTTTCTGTCGCTGGCAACCAAACGGACAAACGGCTTGATTTCCACGTGGcccacccccataa > 2:1312075/1‑238 (MQ=255)gcTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAATGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGccacaacccatag > 1:892099/1‑238 (MQ=255) cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGcccataccccgtt > 1:203410/1‑234 (MQ=255) cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATg > 1:58146/1‑239 (MQ=255) tGGCATGCGATGGAACAGGCCGTGACCACCTGGGAAGGGCAACCCATTAAACCTGATTTAGATTCGGAGGCGATAGCGCATTTCGAGCGCCGCCAGACCCGCTTTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATg < 1:963658/238‑1 (MQ=255) gggtaaCAGTCCGGCACCCCCGGGGAGGGGAAACCCATCAACCCTGATTTAGATGCGCAGGCGTTAGGCAATTGCGGGCGCCCGCAGGGCCGCTCTTCTGTTGAGGTCAGCGGGGCATGGCGGGAAGCGCCCGAAGGTCCGAAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGccacc < 2:772623/234‑1 (MQ=255) aCCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAgcc > 1:633352/1‑238 (MQ=255) cGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCCCCTCAgccgcc > 1:882541/1‑239 (MQ=255) cGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTCATTTACCAGTGGCCAATACCCCTTTTACCGCccccactcacaccccc > 1:1141487/1‑229 (MQ=255) tGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCACACTCTGATTTCTGTCGCTGGCAACCCACCGAGAAAACGTTCTGATTTACCACTTGCCACTACCCATATGACCCCCaccacccaccccccccc > 2:292411/1‑228 (MQ=255) tGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGt > 1:229338/1‑239 (MQ=255) tGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCACTGGCCCATACCCATATGACCGCCACAACCGCAACCGCCGt > 1:967991/1‑239 (MQ=255) gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGGTTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGccgccgga > 1:666237/1‑237 (MQ=255) gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTCTTGATTTTCCAGTGGCCCCTCCCCATATGACGCCCACCACCACGGCAACCGTa > 1:194377/1‑239 (MQ=255) gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAAAGTTCTGATTTACCAGTGGCCCATACCCATAGGACCGCCACCACCGGACCCGCCGTa > 1:987011/1‑239 (MQ=255) gAAGGGAAAACCATTAACCCTGATTTAGTTTCGCGGGCGATAGCGCATATCGAGCGCCGCAAGGGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCCCCCGAAGGTTCGAAATTACTGTTAGTGGAAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGGGGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAgcccatgcc < 1:1008630/238‑1 (MQ=255) cAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGCCCGCCACCACCGCAGCCGCCGTAACCCATGCCCATTcc > 1:757656/1‑238 (MQ=255) tAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACCCTGATTTCTGTCGCTGGCAACCCAACGAGCAAACGATCTGATTTACCAGTGGCCCATCCCCATATGACCCCCCCCACCGCCTCCGCCGCAACCCACTCCCATTCCCGCCCcccg > 2:1017887/1‑239 (MQ=255) gATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAAt > 1:640485/1‑238 (MQ=255) aTTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATa > 1:561122/1‑238 (MQ=255) gCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATTCCCATTCCGGCTCCGCCCGGAATACCCGCCTCAg > 1:254367/1‑238 (MQ=255) aTAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAACCGTTCTGATTTACCACTGGCCCCTACCCATATGACCGCCACCACCGCAGCCGCCGGAGCCCATACCCCTTCCGCCTCCCCACGGCAAAACCCCTTccccccccccg > 2:910278/1‑229 (MQ=255) atCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCCCGCGGAATACCCGCTTCAGCCATCGCGATATCCCGt > 1:64311/1‑239 (MQ=255) aGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCCGGCAACCCAACGAGAAACGGTTCTGATTTACCAGTGGCCCATACCCATATGAACGCACCCACCGCCGCCGCCGTAGCCCCTGCCCATTCCGGCTCCGCGCCGAATAACCCCCTCAACCCCCCCGGTAACCCGTTTc > 2:717691/1‑238 (MQ=255) gcgcCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCa > 1:28360/1‑238 (MQ=255) cgccgcCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATCCCGGCTCCGCGCGGGATACCCGCTTCAGCCATCGCGATATCTCGTTTCAc > 1:664313/1‑238 (MQ=255) gTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCCTTCCGGCTCCGCGCGGCATACCCCCTTCAGCCATCGCGATATCTCGTTTCACCCGTACACCATCTAACGACTGACGCa > 1:1148632/1‑237 (MQ=255) gTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa > 1:175000/1‑239 (MQ=255) ggCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCtt > 1:461550/1‑239 (MQ=255) cTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAACCCATCCCCATTCCGGCTCCGCCCGGAATACCCCCCTCCGCCATCGCGAAATCTCGTTTCACCCCTAATCCATTTAACGCCTGCCCCAAATTCTCCA‑CTCtttt > 2:1043659/1‑237 (MQ=255) cTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTCACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGCATACCCCCTTCAGCCATCGCGATATCTCGTTTCACCCCTAACTCATCTACCGACTGTCGCACATTCTcccccccttt > 1:331476/1‑230 (MQ=255) cccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGCTTTCTGTCGCTGGCAACCCAACGAGACAACGTTCTGATTTCCCAGTGGCCCCTACCCATATGACCGCCAACACCCCAGCCGCCGTAGCCCATGCCCATTACGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCCCGTTTCACCCGTAACTCATCTAACGCCTGCCGCAAATTCTCCCTCTCTTTGGcacccg > 2:885165/1‑232 (MQ=255) cccGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACcccg > 1:1070802/1‑239 (MQ=255) ttCGTAATTCCGGTTAGGGGCAACCTTTGATTTCTGGCGCTGGACACCCAACGAGAAAACGTTCTGATTTCCCAGTGGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAAttt < 1:1104878/238‑1 (MQ=255) ttgcTGTTAGTGGAAACCTCTGTTTTTGGTCGCTGCCACCCCAACGAAAAAACGTTCTGATTTACCAGGGGCCCATCCCCATATGCCCCCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTa < 1:1312075/236‑1 (MQ=255) cacaggTTAGTGGCAATCTCTGTTTCCGGTCGCTGGCAACCCAACGATAAACCGTTCTTATTTACCAGTGGCCCATCCCAATATGCCCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCAACCGCGTTAATTTtgctgc < 1:622283/232‑1 (MQ=255) gTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGTTGCTATCCgg > 1:635480/1‑239 (MQ=255) aGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGGAGCCCAGGCCCATTCCGGCTCCGCGCGGAATACCCCCTTCCGCCAACGCGATATCCCGTTTCACCCGTAACTCATCTAACGTCTCACGCCCATGCCCCCTCTCTTTTGCGACCCAGTTAATTTtgttgcgaccgggggg > 2:672223/1‑229 (MQ=255) gCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCCCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGtt > 1:1158439/1‑238 (MQ=255) cAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTcg > 1:910224/1‑239 (MQ=255) aCTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCCCGGAATACCCGCCTCAGCCATCCCGATATCTCGTTTCACCCGTACCCCACCTAACGACTGCACCAAATTCTCCATCTCTTTGCCACACGCGTTAATTTTCCTCCTATCCgaggggctgtg > 2:622283/1‑227 (MQ=255) tgattcgttgcGCCGGCCACCCAACGAGAAAACGTTCTGATTCACCAGTGGCCCATCCCCATATGACCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTaa < 1:757472/229‑1 (MQ=255) tGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCTCGGCTaa > 1:361066/1‑239 (MQ=255) tGATTTCTGCCGCTGACAACCCAACGAAAAACCTTTCTTATTTCCCGGGGCCCAATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTaa < 1:231515/239‑1 (MQ=255) ttttGTGTCCCTGGAAACCCAAGGGAAAAACGTTCTGTTTTACCAGTGGCCCATCCCCATAGCACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACa < 1:1043659/238‑1 (MQ=255) aTTTCGGTCGCGGGCACCCCAAGGAAAAACCTTTCTGATTTCCCAGGGGCCCATCCCCATATGACCGCCCCCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACa < 1:150213/239‑1 (MQ=255) cTGTCCATGGAACCCCAGCGAAAAACCGTTCTTATTTCCCAGGGCCCCATACCCATATGCCCGCCCCCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGc < 1:1116084/239‑1 (MQ=255) gTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCCCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTTGCGACCGCGTTACTTTTGCGACTATCCGGGGGGTTCCAGGCTAACAGGGCAt > 2:533641/1‑239 (MQ=255) ccgcggccAACCAAACGAGAAACCGTTTGGATTACCCAGTGGCCCATCCCCATAGGACCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAtt < 1:885165/232‑1 (MQ=255) ccTGGCACCCCAACGAGAAACCTTTCTGATTTCCCAGTGCCCCATCCCCATAGGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGt < 1:292411/238‑1 (MQ=255) aaCGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATACCTCGTTTCACCCGTAACTCATCTAACACCTGACGCAAATTCCCCACCCCTTTGGGGACCCCGTTATCTTTGCTGCTATCCGGGGGGTTCGCGGCTAATCGGGCATTGTATTCATAAc > 2:1053102/1‑237 (MQ=255) aCGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCt > 1:590527/1‑85 (MQ=255) ctcttgttcaCCAGGGGCCCATCCCCATAGGACCGCCACCCGCCCACCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGt < 1:270182/230‑1 (MQ=255) tCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGtt > 1:1150180/1‑239 (MQ=255) tACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGGATTCATAACGCTTCGTCACCAGTTGCTGTTg > 1:1167438/1‑239 (MQ=255) ggTGCCCCATACCCATATGACCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGt < 1:1291871/238‑1 (MQ=255) gTGGCCCATACCCATATGACCGCCACCACCTCAGCAGCCGTAGCCCATGCCCATTCCGGCGCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCCAATTCTCCATCTCTTTTGCGACCGCGTTAATTTTGCTGTTATACGGTGCGTTCGCGGCTACCAGGGCTTTGTATTCATAACGCTTCGTCACCCATTTCTTTTGCAggg > 2:905002/1‑237 (MQ=255) ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATaa > 1:166434/1‑209 (MQ=255) ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGGATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTgc > 1:23296/1‑238 (MQ=255) ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAAACGGGCCTTGTTTTCATAACCCTTCGTCACCATTTCCGGTTgagggggg > 2:1164465/1‑232 (MQ=255) ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCAATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGCAACCAGTTGCTGTTGCACTgc > 1:583732/1‑238 (MQ=255) gCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTgcg < 1:1109617/238‑1 (MQ=255) tacccataTGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCtt > 1:312687/1‑239 (MQ=255) | GCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCTT > NC_000913/4201047‑4201515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |