Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 4,587,542 | A→G | 14.3% | G198G (GGA→GGG) | mrr → | methylated adenine and cytosine restriction protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,587,542 | 0 | A | G | 14.3% | 193.4 / 3.1 | 78 | G198G (GGA→GGG) | mrr | methylated adenine and cytosine restriction protein |
Reads supporting (aligned to +/- strand): ref base A (13/52); new base G (8/5); total (21/57) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.44e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCGTCGATTTAGATCCGAAAGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTATGGTGTTGGTTGATGGGG > NC_000913/4587307‑4587771 | ccctCGTTTTAGATCCGAAACCCGTCTTCTCCGGTTATGAAGAACTTGCAAAGAGCAGCCCGGACGGTCGGTTAGAACAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGAt < 2:547755/236‑1 (MQ=255) cGATTTAGAGCCGAAAGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCACGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGAtggt < 1:966230/238‑1 (MQ=255) gATCCGAAAGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGa < 1:560915/239‑1 (MQ=255) tCCCAAAGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGCCGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGa < 1:6516/237‑1 (MQ=255) gccGAAAGCCGACTCGCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGa < 1:887284/236‑1 (MQ=255) aaaGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGACGTCATTGTTCTGGCTG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGTTGATTTGCATCGTGTTGGCGGTACTGGGGAGGGGGGCACCGgtggtgg > 1:1297053/1‑238 (MQ=255) aaaGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCCCCTTGTTGATTTGCAGCGGTTTTGCGGTACTGTAGATGGTGGGACCGCTggggg > 1:550188/1‑236 (MQ=255) gaatctcCCGAACATGAAGAACTTGCAAAGGGCCGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATc < 1:781587/236‑1 (MQ=255) ctctCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCCCCGGGATGATTTTCAGCGGGTTGGCGGTACTGGGGATGGTGGCATCGCTGGGGTGaattc > 1:1116275/1‑233 (MQ=255) accccccggcgaTGGAGGACTTGCAAGAGGTAGCCCGGAGCATCTGTGAGATCAGGGTGTAAATGGTCTCCGTGCGGGTGGGGCTGATGATGTTCTGGAAAACTTATGTCAGGTTTCTCCTTTGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCGCCGTGATGATTTGGAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGc < 2:729183/228‑1 (MQ=255) cccGATCATGAAGAACTTGCAAAGGGCCGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTTATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGa < 2:283800/239‑1 (MQ=255) tCATTAAGAACTTGCAAAGAGCAGCCCGGACGATCGGGTTGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACGTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAAc < 2:845614/239‑1 (MQ=255) gaagaaCTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGGGATGGTGGCCTCGATGGTGTGATATCGCTTGATAAACttt > 1:454329/1‑237 (MQ=255) aagtaCTTGCAAAGGGCCGTCCGGACGATGGGTTAGATCGGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGc < 2:732877/239‑1 (MQ=255) aaggaCTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGGTAAAAGAGCGTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGc < 1:214822/239‑1 (MQ=255) agaaCTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTTGCGGTACTGGAGATGGGGGCATCGATGGTGGGGTATGGCTTGATAAAATTGGcc > 1:156397/1‑239 (MQ=255) agaaCTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGcc < 1:659652/239‑1 (MQ=255) agaaCTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGc < 1:605578/238‑1 (MQ=255) cTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCCCCGTGATGATTTTCAGCGGGTTGGCGGTACTGGAGATGGTGGCAGCGATGGGGTGATATCGCTTTGTAAACTTGTGCTggg > 1:114992/1‑238 (MQ=255) cTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGGGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCAACGGAGGTGTGAGATCGCTTGTTAAACTTGGCCCggg > 1:611709/1‑238 (MQ=255) attGCAAAGGGGAGCCGGGTGGGTTGGGTAGATCAGGAGCTAAAAGGGCTTCGTGATGCGGGGGCTGATGAGGTTCTGGAAAACTTATTTCAGGTTTCCTCGTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTGGCATCGCCTGGGGTAGGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGga < 2:626841/238‑1 (MQ=255) tGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGGGATGGTGGACTCGATGGGGGGATATCGCTTGGTAAACTTGGCCTGggga > 1:555542/1‑239 (MQ=255) gCAAAGGGCAGCCCGGACGATCGGTTGGATCAGGCGCTAAAAGTGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGaa < 1:950007/239‑1 (MQ=255) gcCCGGGCTTTCGGTTAGGTCAGGTGGTAAAAGTGCTGCGTGTGGTGTGGGCTGATGTGTTTCTGGAAACCTTATTGCAGGTTTCTCCTTCGTGCATGGAAGGCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGtt < 2:446124/239‑1 (MQ=255) cccGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGGGTTGGCGGTAACGGGGATGGGGGCATCGGTGGGGTGTATTCGCTTGGTAAACTTGGGCTGGGGAAA‑GTTTAttttt > 1:748034/1‑238 (MQ=255) ccGGACGAGCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATTCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGtt < 1:669781/237‑1 (MQ=255) ggTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGt < 1:322365/239‑1 (MQ=255) ggTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGt < 1:1113843/239‑1 (MQ=255) gTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGGGATGGTGGCATCGATGGTGTGATATCg < 1:441920/193‑1 (MQ=255) ttgATTAGGGGCTAAAAGGGCTTCGTTAGGCGGTGGCTGATGGTGTTCTGGAAAACTTATTGCAGGTTTCTCCTTGGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTgg < 2:1270284/237‑1 (MQ=255) aGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCAACGTGATGATTTGCAGCGTGTTGGAGGGACTGGAGATGGTGGCATCCATGGTGTGATATCGATTGTTTAACTTGGCCTGGGGAAA‑GTTTATTGTCAGGGaaagagatggc > 1:262356/1‑231 (MQ=255) ggtcgggCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCa < 1:61357/234‑1 (MQ=255) tCAGGCGCTAAAAGGGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGa < 1:1047488/239‑1 (MQ=255) tCAGGAGCTAAAGGAGCTTCGTGATGCCGTGGCTGCGGAGGTTCGGGAAAACTTATTGCAGGTTTCTCCTTCGCCCTGTGAAGTCATTGTTCTGTATG‑GTTTACATCGCCTGGGGTATGGCGGGCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGa < 1:251036/239‑1 (MQ=255) cAGGGGCTTACAGGGTTTCGTGGTGGGGGGGGGGATGGGGTTCGTGAAACTTGTTTGCTGGTTTTCCCTTCGTGCTTTTAAGCCATTTTTCTGGAGG‑TTTGGCATCGCCTGGGGTATTGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGa < 2:921915/238‑1 (MQ=255) aaaGATATTCGTGATGCGGTGGCTGAGGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCGGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTagg < 1:763572/239‑1 (MQ=255) aaGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTaggc < 1:879715/239‑1 (MQ=255) gCTTCGGTATGGTGTGGTTGATGGGGTTGTGGAATACTTATTGCAGGTTTCTCCGTCGGTCTTTGAACTCATTGTCTTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTaggcaggc < 2:609057/239‑1 (MQ=255) cTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGGGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGTGGGCATCGATGGTGGGGTATCGCTTGATAAACTTGGCCTGGGGAAA‑GTTTATGTTCAGGCAAACAGTTGGCAGAGA‑ACTGTAGGCAGGcc > 1:839014/1‑239 (MQ=255) ttCGTGATGGGGTGGCTTATGGTGTTCTGGAAAACTTTTTGCAGGTTTCACCTTCGAGTTTGTGAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGcc < 2:395170/238‑1 (MQ=255) ttgtggTTTTGGAAAACTTTTTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTAc < 2:839014/235‑1 (MQ=255) ttCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGa > 1:34950/1‑133 (MQ=255) ttCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGa < 2:34950/133‑1 (MQ=255) tttGGAAAACGTATTGCCGGGTTCTCCTTCGCGCTTTGAAGTCATTGTTCGGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGGGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCa < 1:1249943/236‑1 (MQ=255) tgtgagaagtttATTGGCGGTTTCGCTTTCGGGCTTTGACGGTATTGTTCTGGATG‑GTTTGCATGGGCTGGGTTATGGCGGCAGCCGTGATGAGTTGCAGCGTGTTGACGGTACTGGAGATGGTGGCATCGATGGTGTGATCTCGCTTGATAACCTTGTCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTGGGCAGAAT‑ACTGGAGGCAGGCAAGAA‑TTACAGGCATTTTACGGCGCa < 2:790845/228‑1 (MQ=255) aaaCTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCActggct < 1:1049650/238‑1 (MQ=255) gttttgtcccttttCTCCTTGGCCCTTTGGATTCATTGTT‑TGGTGGTTTTTGGATCGGCTGGGGAAGTGCGGCGCCCGTGATGATGTGCAGCGGGTTGGCGGTAGTGGGGATGGTGGCATCGATGGTGGGATGTCGCTTGATAAACTTGGCCTGGAGAAA‑GGTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTTCGGAGCTCTGGCTGGGc < 2:1203954/228‑1 (MQ=255) gTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGGGATGGTGGCATCGATGGGGTGATATCGCTTGATAAACTTGGGCTGGGGAAA‑GGTTATGTTCAGGCAAAACGTTTGCCGAAT‑ACTTTAGGCAGGCCCAAA‑TTTAAGGCCTTTTACGGCGCCCTGGCCGGGCaaaaaaggaa > 1:981761/1‑234 (MQ=255) tttCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGCTTTGCAGGGGGTTGGCGGTACTGGAGAGGGTGGGATCGATGGGGTGATATCGCTTGGTAAACTTGGCCTGGAGAAA‑GGTTATGTTTGGGGAAAACGTTTGGAGAAA‑AATGTAGGGAGGGCCGAATTTAGAGGCTTTTTAGGGCGC‑CTGGGTGGGGAAAAAACGaaa > 2:975280/1‑239 (MQ=255) gccTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGTCGGCCACCGTGATGATGTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTg < 1:842937/238‑1 (MQ=255) ttCGGGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTgggg < 1:975280/239‑1 (MQ=255) ttCGCTTTTGGAAGTCTTTGTTTTGGATG‑TTTTGGATCGCTTGGGGTAGGGGGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGGTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTgggg < 2:454329/239‑1 (MQ=255) cgcTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGTAGCGTGTTGGCGGTACTGGAGAGGGTGGCACCGATGGGGTGATATCGCTTGATAAAATTGGCCTGGAGGAA‑GTTTTTGTTCAGGGAAAACGTTGGCAGAAT‑ACCTTGGGCAGGGCCAAA‑TTACCGGGATTTTATGGCGCACAGGTTTGGGAAAAAAGGAAAC‑AGgggggggt > 2:1080649/1‑235 (MQ=255) cATTGTTCTGGATG‑GTTTGCATCGACGGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACtt < 1:1185873/239‑1 (MQ=255) gTTCTGGATT‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTgg < 1:1229833/239‑1 (MQ=255) tCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAAATTGGCCTGGAGAAA‑GGTTATGTTCAGGCAAAAAGTTGGCAGGAT‑ACTGTATGCCGGCCAGAA‑TTACAGGCATTTTACGGGGCCCTGGCTGGGCAAAAAACGCAAC‑GGGGGGGGTTTTTTCTCCCTTCTgggt > 1:144665/1‑237 (MQ=255) tGGATA‑TTTTGCGTCGCCT‑GGGTATGTCAGCCACCGTGATGATTTGCAGCGTGTGGGCGGTGCTGGAGATGGTGGCATCGATGGAGTGATATCGATTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGAAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTa < 1:728280/239‑1 (MQ=255) tttGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTTCTGCGGATGGTGGCCGCCATTGGGTGATATCGCTTGATAAACTTGGCCTTGGGAAAGGTTTAGGTTCGGGCAAAAC‑TTGGGAGAATAACTG‑AGGCCGGGCCGGA‑TATCAGGGCTTATTCGGCGGACTGGGGGGGAGCAAAGCAAAACACGGGGGTGTTT‑TTTCCCCTTCTGGTTTTatgttcc > 2:914026/1‑233 (MQ=255) tATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGTGCACTGGCTGGGCAAAAAGCGAAAC‑GTg < 1:23430/190‑1 (MQ=255) gccccccGTGGTGATTGGCGGCGGGGTGGGGGTACTGGGGATGGTGGGAGCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTAGGTTCAGGCAAAACGGTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACGTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAAt < 2:144665/233‑1 (MQ=255) aCCGTGATGATTTGCAGGGTGTTGGCGGTACTGGAGATGGTGGCCTCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTc < 1:1157002/239‑1 (MQ=255) cgggctgatTTGCAGCGTGTTGGCGTTACTGGAGATGGTGGGTTCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTAGGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑Ga < 1:370865/234‑1 (MQ=255) cGTTATGTTTTGCAGCGTTTTGGCGGTACTGGAGATGGTTGCATCGGTGGTGTGATATCGCTTGATAAACTTGGGCTGGAGAAA‑GTTTATGTTCAGGCAAAACGGTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑Ga < 2:981761/239‑1 (MQ=255) cGTGATTCTTTGCAGCGTGTTGGCGGTATTGGGGATGGTGTCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCTGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑Ga < 2:262356/239‑1 (MQ=255) aagatTTGCAGCCAGCTGCCGGAACGTGGGATGGTGGCATCGATGGCGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACCGGCATTTTACCGCCCACTGGCTGGGCAAAAAGCGAAAC‑GAGGGGGAGTTCTTACCACTTCCGGAGTTACTTCTCAGGCGCGGGAATGTTCCCAAACCCTC‑Ggggga > 2:70861/3‑238 (MQ=255) tgatTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGAATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTa < 1:871297/239‑1 (MQ=255) gatTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTTGGATAGCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTa < 1:1284461/238‑1 (MQ=255) ttcagtgggtTGGCGTTACTGGAGATGGTGGCATTGATGGTGTGAAATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTATGgtg < 1:1143635/231‑1 (MQ=255) tggaggatgtTTGCGGTGCTGGAAATGGTGGCATCGATGGTTTGATATCGCTTGATAAACGTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTATGgtg < 1:673356/232‑1 (MQ=255) gCGTGTTGGCGGTACTGGAGATTGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGa > 2:616496/1‑98 (MQ=255) gCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGa < 1:616496/98‑1 (MQ=255) tgtTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGGGCACTGGCTGGGCAAAAAGGGAAAC‑GTGGGGTGTTTTTTACCACTCCTGGATTTACTTCTCCGGGGCGGGGCTTTGGCCAATCCGCCTGGGGGTAGGGTgtgggtt > 2:963941/1‑239 (MQ=255) tgtTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTggg < 1:226663/163‑1 (MQ=255) tgtTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTggg > 2:226663/1‑163 (MQ=255) tttGGCGGTTCTGGGGATGGGGGCATGGATGGGTGGTTATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGAAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTATGGTgttggttg < 2:114992/237‑1 (MQ=255) ggTATTGGAGGTGGGGGCATCGATGGTGTGATACCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTATGGTGTTGGTTGATgggg < 2:156397/238‑1 (MQ=255) ggTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTATGGTGTTGGTTGATgggg < 1:70861/238‑1 (MQ=255) tACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTATGGTgttgg < 1:168593/227‑1 (MQ=255) | CCGTCGATTTAGATCCGAAAGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATG‑TTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAA‑GTTTATGTTCAGGCAAAACGTTGGCAGAAT‑ACTGTAGGCAGGCCAGAA‑TTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAAC‑GTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTC‑GAGGGTATGGTGTTGGTTGATGGGG > NC_000913/4587307‑4587771 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |